HHsearch alignment for GI: 254780624 and conserved domain: TIGR03533
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=99.48 E-value=7.6e-14 Score=109.38 Aligned_cols=137 Identities=22% Similarity=0.324 Sum_probs=98.6
Q ss_pred CCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE--
Q ss_conf 997798602335577777664138863278721332222111100000112222222222233345755446740366--
Q gi|254780624|r 70 KDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFEANSFDACTLA-- 147 (265)
Q Consensus 70 ~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~d~sfD~V~~s-- 147 (265)
T Consensus 121 ~~~~iLDlGtGSG~Iai~la~~~-p~~~v~a~DiS~~Al~~A~~N~~~~~l~~rv~~~~~D~~~-~~~~~~fDlIVSNPP 198 (284)
T TIGR03533 121 PVKRILDLCTGSGCIAIACAYAF-PEAEVDAVDISPDALAVAEINIERHGLEDRVTLIQSDLFA-ALPGRKYDLIVSNPP 198 (284)
T ss_pred CCCEEEEECCCCHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHH-HCCCCCCCEEEECCC
T ss_conf 77715552168079999999878-9987999989999999999999860854336888351433-145777787997799
Q ss_pred EE-----------ECC------------CHHHHHHHCCCCHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHH
Q ss_conf 42-----------013------------2134432012100048521177630554455101123456531113321025
Q gi|254780624|r 148 FG-----------IRN------------MPHITLVLQEIYRILKCGGRLLVLEFSEVQGPVFKKIYDMWSFKVIPQLGRF 204 (265)
Q Consensus 148 f~-----------l~~------------~~d~~~~l~e~~RvLKpGG~~~i~df~~p~~~~~~~~~~~y~~~iiP~~g~~ 204 (265)
T Consensus 199 YI~~~e~~~l~~ev~~EP~~AL~gG~dGL~~yr~Ii~~a~~~L~pgG~l~l-EiG~------------------------ 253 (284)
T TIGR03533 199 YVDAEDMADLPAEYHHEPELALASGEDGLDLVRRILAEAADHLNENGVLVV-EVGN------------------------ 253 (284)
T ss_pred CCCHHHHHHCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE-EECC------------------------
T ss_conf 788465544976411586998758955879999999988984256978999-9797------------------------
Q ss_pred HCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE
Q ss_conf 428876865789999968998999999997599537999855664999
Q gi|254780624|r 205 IAGDEEPYQYLIESIRRFPNQQDFAAVISAAGFSNVSFTNYTNGVVAL 252 (265)
Q Consensus 205 ~~~~~~~Y~yL~~Si~~f~~~~el~~~l~~aGF~~v~~~~~~~Gi~~i 252 (265)
T Consensus 254 -------------------~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (284)
T TIGR03533 254 -------------------SMEALEEAYPDVPFTWLEFENGGDGVFLL 282 (284)
T ss_pred -------------------CHHHHHHHCCCCCCEEEEECCCCCEEEEE
T ss_conf -------------------88999986689996477415898369998