HHsearch alignment for GI: 254780624 and conserved domain: TIGR03587
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme
Probab=98.17 E-value=5.1e-06 Score=58.94 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=77.4
Q ss_pred CCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 99779860233557777766413886327872133222211110000011222222222223334575544674036642
Q gi|254780624|r 70 KDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFEANSFDACTLAFG 149 (265)
Q Consensus 70 ~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~d~sfD~V~~sf~ 149 (265)
T Consensus 43 ~ikSilE~GcNIGlNL~ALk~L~-P~~~l~gIEIN~~A~~~lk~~~------~~~~i~n~SIld-~~~~~~~DLv~t~GV 114 (204)
T TIGR03587 43 KIASILELGANIGMNLAALKRLL-PFKHIYGVEINEYAVEKAKAYL------PNINIIQGSLFD-PFKDNFFDLVLTKGV 114 (204)
T ss_pred CCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHC------CCCEEEECCCCC-CCCCCCEEEEEEEEE
T ss_conf 88826896688477699998748-7440499953999999998658------972699653346-677874238998308
Q ss_pred ECCC--HHHHHHHCCCCHHCCCCCEEEEEECCCCC
Q ss_conf 0132--13443201210004852117763055445
Q gi|254780624|r 150 IRNM--PHITLVLQEIYRILKCGGRLLVLEFSEVQ 182 (265)
Q Consensus 150 l~~~--~d~~~~l~e~~RvLKpGG~~~i~df~~p~ 182 (265)
T Consensus 115 LIHinP~~L~~vy~~l~~~s~k--yili~EYynp~ 147 (204)
T TIGR03587 115 LIHINPDNLPTAYRELYRCSNR--YILIAEYYNPS 147 (204)
T ss_pred EEEECHHHHHHHHHHHHHHHCC--EEEEEEECCCC
T ss_conf 9997889999999999985205--59999942899