HHsearch alignment for GI: 254780624 and conserved domain: pfam01269

>pfam01269 Fibrillarin Fibrillarin.
Probab=97.96  E-value=7.2e-05  Score=51.53  Aligned_cols=96  Identities=13%  Similarity=0.190  Sum_probs=69.7

Q ss_pred             CCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC----CCCCCCHHCCCCCCCCCCCCCCCCCCC----CCCC
Q ss_conf             67997798602335577777664138863278721332222----111100000112222222222233345----7554
Q gi|254780624|r   68 KSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEML----SVGRDRAFKENLQDCITFIEANAETLP----FEAN  139 (265)
Q Consensus        68 ~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml----~~a~~r~~~~~~~~~i~~~~~da~~lp----~~d~  139 (265)
T Consensus        71 i~~gskVLYLGAasGTTVSHvsDIvg~~G~VyAVE~spr~~RdL~~la~~-------R~NIvPIl~DAr~P~~Y~~lv-~  142 (229)
T pfam01269        71 IKPGSKVLYLGAASGTTVSHVSDIVGPEGVVYAVEFSPRVGRELINVAKK-------RPNIVPILEDARHPQKYRMLV-E  142 (229)
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHC-------CCCCEEEECCCCCHHHHHHHC-C
T ss_conf             58998799944777985767887228895399997173557899999742-------799445766778756765425-5


Q ss_pred             CCCCCEEEEEECCCHHHH---HHHCCCCHHCCCCCEEEEE
Q ss_conf             467403664201321344---3201210004852117763
Q gi|254780624|r  140 SFDACTLAFGIRNMPHIT---LVLQEIYRILKCGGRLLVL  176 (265)
Q Consensus       140 sfD~V~~sf~l~~~~d~~---~~l~e~~RvLKpGG~~~i~  176 (265)
T Consensus       143 ~VD~ifq-----DvaQ~~Qa~i~~~Na~~FLk~gG~~~l~  177 (229)
T pfam01269       143 MVDVIFA-----DVAQPDQARILALNAKYFLKNGGYFMIS  177 (229)
T ss_pred             CCCEEEE-----CCCCHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             6668996-----2787778999999999861269889999