HHsearch alignment for GI: 254780624 and conserved domain: pfam02005
>pfam02005 TRM N2,N2-dimethylguanosine tRNA methyltransferase. This enzyme EC:2.1.1.32 used S-AdoMet to methylate tRNA. The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNAs. The enzyme is found in both eukaryotes and archaebacteria
Probab=97.43 E-value=0.00015 Score=49.56 Aligned_cols=106 Identities=22% Similarity=0.290 Sum_probs=79.4
Q ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 446799779860233557777766413886327872133222211110000011222222222223334575-5446740
Q gi|254780624|r 66 PRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFE-ANSFDAC 144 (265)
Q Consensus 66 ~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~-d~sfD~V 144 (265)
T Consensus 45 ~~~~~~~~iLDalsasGiR~iRya~E~~~~~~V~~NDi~~~a~~~i~~N~~lN~~~~~~~~~~~DAn~lm~~~~~~fD~I 124 (375)
T pfam02005 45 KKLGRGIIVLDALSASGIRAIRFALEVPGVEEVFANDISPKAVELIKENVKLNEVENIVVINGDDANMLMRENHRRFDVI 124 (375)
T ss_pred HCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCEE
T ss_conf 30258866975467541999999974699866999559989999999988865998737875475999998558867568
Q ss_pred EE-EEEECCCHHHHHHHCCCCHHCCCCCEEEEE
Q ss_conf 36-642013213443201210004852117763
Q gi|254780624|r 145 TL-AFGIRNMPHITLVLQEIYRILKCGGRLLVL 176 (265)
Q Consensus 145 ~~-sf~l~~~~d~~~~l~e~~RvLKpGG~~~i~ 176 (265)
T Consensus 125 DlDPfG-----Sp~pfldsAi~av~~~GlL~vT 152 (375)
T pfam02005 125 DLDPFG-----SPAPFLDSAVQSVKRGGLLCVT 152 (375)
T ss_pred EECCCC-----CCCHHHHHHHHHHCCCCEEEEE
T ss_conf 678999-----9217799999983159889999