HHsearch alignment for GI: 254780624 and conserved domain: pfam04445

>pfam04445 DUF548 Protein of unknown function (DUF548). Protein of unknown function found in proteobacteria. In Salmonella typhimurium, expression of this protein is regulated by heat shock.

Probab=90.63  E-value=0.26  Score=28.65  Aligned_cols=86  Identities=21%  Similarity=0.290  Sum_probs=59.6

Q ss_pred             HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC---CCCCCHHCC-----CCCCCCCCCCC
Q ss_conf             9998520644679977986023355777776641388632787213322221---111000001-----12222222222
Q gi|254780624|r   58 EAMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLS---VGRDRAFKE-----NLQDCITFIEA  129 (265)
Q Consensus        58 ~~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~---~a~~r~~~~-----~~~~~i~~~~~  129 (265)
T Consensus        63 e~l~KAvG~k~~~~p~VlDATAGLG~DafiLAsLG---~~VtliEr~pvl~~LL~Dal~RA~~~~~~~~~~~~rm~L~~g  139 (235)
T pfam04445        63 EAIAKAVGIKGGYLPTVLDATAGLGRDAFVLASLG---CRVRLVERHPVVAALLEDGLQRAYQDPEIGAWLQARLHLLHG  139 (235)
T ss_pred             HHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEECC
T ss_conf             58999866788999838987877578899998189---969999788999999999999987481557999962899838


Q ss_pred             CCCC-CCCCCCCCCCCEE
Q ss_conf             2333-4575544674036
Q gi|254780624|r  130 NAET-LPFEANSFDACTL  146 (265)
Q Consensus       130 da~~-lp~~d~sfD~V~~  146 (265)
T Consensus       140 ds~~~l~~~~~~~DvIYL  157 (235)
T pfam04445       140 SSADQLEPNIDQPDVVYL  157 (235)
T ss_pred             CHHHHHHHCCCCCCEEEE
T ss_conf             879997524689878997