HHsearch alignment for GI: 254780625 and conserved domain: PRK05179
>PRK05179 rpsM 30S ribosomal protein S13; Validated.
Probab=95.50 E-value=0.014 Score=36.56 Aligned_cols=49 Identities=31% Similarity=0.381 Sum_probs=39.3
Q ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4210011126543564136899999987178778312222001015899999999878
Q gi|254780625|r 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 (289)
Q Consensus 165 ~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~ 222 (289)
T Consensus 13 K~v~~AL---t~I~GIG~~~A~~Ic~~lgId~~~k~g~Ls~~q------i~~I~~~I~ 61 (122)
T PRK05179 13 KRVVIAL---TYIYGIGRTRAKEILAAAGIDPDTRVKDLTDEE------LDKLREEID 61 (122)
T ss_pred CCHHHHH---HHHCCCCHHHHHHHHHHCCCCCCCCHHHCCHHH------HHHHHHHHH
T ss_conf 7868477---300275899999999982999766887656999------999999998