HHsearch alignment for GI: 254780625 and conserved domain: pfam01149
>pfam01149 Fapy_DNA_glyco Formamidopyrimidine-DNA glycosylase N-terminal domain. Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidized purines from damaged DNA. This family is the N-terminal domain contains eight beta-strands, forming a beta-sandwich with two alpha-helices parallel to its edges.
Probab=99.95 E-value=1.6e-27 Score=196.88 Aligned_cols=116 Identities=41% Similarity=0.721 Sum_probs=105.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEECCCC-CCCCCCHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCEE
Q ss_conf 6764367889889998679778899964833-265787789997289889999605308999503553100152553279
Q gi|254780625|r 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF 80 (289)
Q Consensus 2 PElPEVe~~~~~l~~~l~g~~I~~V~~~~~~-~~~~~~~~~~~~L~G~~I~~v~r~GK~l~l~l~~~~~L~~HlgM~G~~ 80 (289)
T Consensus 1 PELPEVe~~~~~l~~~~~g~~I~~v~~~~~~~~~~~~~~~~~~~l~G~~i~~v~RrGK~i~~~l~~~~~l~~HLgMtG~~ 80 (117)
T pfam01149 1 PELPEVETVRRGLEPLLVGRRITKVEVRRPKILRGPEPEEFIEALEGRTITDVRRRGKYLLLELDGGLVLVIHLGMTGRL 80 (117)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCEEE
T ss_conf 98701999999999985899888999756871467784999977499998469850269999999998899816775689
Q ss_pred EEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEE
Q ss_conf 9814785422458766338999706887604899981587664100
Q gi|254780625|r 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 (289)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~R~fG~~~ 126 (289)
T Consensus 81 ~~~~~~----~~~~kh~~v~~~f~~g~-----~l~f~D~R~FG~i~ 117 (117)
T pfam01149 81 RVVEPE----DPPPKHTHVVLHLDDGR-----ELRFVDPRRFGRVR 117 (117)
T ss_pred EECCCC----CCCCCCEEEEEEECCCC-----EEEEECCCCCCCCC
T ss_conf 963787----89998589999979999-----99998588883139