HHsearch alignment of GI: 254780625 and MMDB domain: 3a46_A_1-143
>3a46_A (A:1-143) Formamidopyrimidine-DNA glycosylase; helix two turns helix, zinc-LESS finger, hydrolase, THF, glycosidase, lyase, multifunctional enzyme; HET: DNA 3DR; 2.20A {Acanthamoeba polyphaga mimivirus} PDB: 3a45_A* 3a42_A
Probab=99.98 E-value=1.3e-32 Score=229.07 Aligned_cols=141 Identities=21% Similarity=0.193 Sum_probs=124.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC--CCHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCC
Q ss_conf 967643678898899986797788999648332657--877899972898899996053089995035531001525532
Q gi|254780625|r 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSG 78 (289)
Q Consensus 1 MPElPEVe~~~~~l~~~l~g~~I~~V~~~~~~~~~~--~~~~~~~~L~G~~I~~v~r~GK~l~l~l~~~~~L~~HlgM~G 78 (289)
||||||||+++++|++.++|++|+.|++.+++..+. .+.++.+.|.|++|.+|+|+||||+++|+++.+|++||||+|
T Consensus 1 MPELPEVe~~~~~L~~~l~g~~i~~v~~~~~~~~~~~~~~~~~~~~l~G~~i~~v~r~GK~l~~~l~~~~~L~~HlgM~G 80 (143)
T 3a46_A 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLPLKVSNVDTKGKFLWFELFDPNDKSNKWYIWN 80 (143)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCEEEEEEECSSHHHHSCCBTHHHHHHTCCEEEEEEEEETTEEEEEEEETTEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEE
T ss_conf 97479999999999998589999899988885225788668999723785799999877699999668864245655998
Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf 799814785422458766338999706887604899981587664100145530100532356555332211
Q gi|254780625|r 79 SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS 150 (289)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~R~fG~~~~~~~~~~~~~~~l~~lGpD~l~~~ 150 (289)
+|++...+.. .+.+|.|+.+.|+++. .++|.|+|+||.++++++.... .+.+++||||||+++
T Consensus 81 ~~~~~~~~~~---~~~k~~~~~l~~~~~~-----~L~f~d~r~fg~~~l~~~~~~~-~~~l~~LGpDpL~~d 143 (143)
T 3a46_A 81 TFGLTGMWSL---FEAKYTRAVLSFDNEL-----MAYFSDMRNFGTFKFSNSEKEL-KRKLNELGPDFLKND 143 (143)
T ss_dssp ECTTTEEEES---SCCTTEEEEEEEGGGC-----EEEEEESSCCCEEEEECCHHHH-HHHHTTSCCBTTTCS
T ss_pred EEEECCCEEE---CCCCCCEEEEECCCCE-----EEEEEECCCCCEEEEECHHHHH-HHHHHHCCCCHHHHH
T ss_conf 8897254044---2577633554023205-----9999742413168872214440-134430376303557