HHsearch alignment of GI: 254780625 and MMDB domain: 3a46_A_1-143

>3a46_A (A:1-143) Formamidopyrimidine-DNA glycosylase; helix two turns helix, zinc-LESS finger, hydrolase, THF, glycosidase, lyase, multifunctional enzyme; HET: DNA 3DR; 2.20A {Acanthamoeba polyphaga mimivirus} PDB: 3a45_A* 3a42_A
Probab=99.98  E-value=1.3e-32  Score=229.07  Aligned_cols=141  Identities=21%  Similarity=0.193  Sum_probs=124.1

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC--CCHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCC
Q ss_conf             967643678898899986797788999648332657--877899972898899996053089995035531001525532
Q gi|254780625|r    1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSG   78 (289)
Q Consensus         1 MPElPEVe~~~~~l~~~l~g~~I~~V~~~~~~~~~~--~~~~~~~~L~G~~I~~v~r~GK~l~l~l~~~~~L~~HlgM~G   78 (289)
                      ||||||||+++++|++.++|++|+.|++.+++..+.  .+.++.+.|.|++|.+|+|+||||+++|+++.+|++||||+|
T Consensus         1 MPELPEVe~~~~~L~~~l~g~~i~~v~~~~~~~~~~~~~~~~~~~~l~G~~i~~v~r~GK~l~~~l~~~~~L~~HlgM~G   80 (143)
T 3a46_A            1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLPLKVSNVDTKGKFLWFELFDPNDKSNKWYIWN   80 (143)
T ss_dssp             -CCHHHHHHHHHHHHHHHTTCEEEEEEECSSHHHHSCCBTHHHHHHTCCEEEEEEEEETTEEEEEEEETTEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEE
T ss_conf             97479999999999998589999899988885225788668999723785799999877699999668864245655998


Q ss_pred             EEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf             799814785422458766338999706887604899981587664100145530100532356555332211
Q gi|254780625|r   79 SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS  150 (289)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~R~fG~~~~~~~~~~~~~~~l~~lGpD~l~~~  150 (289)
                      +|++...+..   .+.+|.|+.+.|+++.     .++|.|+|+||.++++++.... .+.+++||||||+++
T Consensus        81 ~~~~~~~~~~---~~~k~~~~~l~~~~~~-----~L~f~d~r~fg~~~l~~~~~~~-~~~l~~LGpDpL~~d  143 (143)
T 3a46_A           81 TFGLTGMWSL---FEAKYTRAVLSFDNEL-----MAYFSDMRNFGTFKFSNSEKEL-KRKLNELGPDFLKND  143 (143)
T ss_dssp             ECTTTEEEES---SCCTTEEEEEEEGGGC-----EEEEEESSCCCEEEEECCHHHH-HHHHTTSCCBTTTCS
T ss_pred             EEEECCCEEE---CCCCCCEEEEECCCCE-----EEEEEECCCCCEEEEECHHHHH-HHHHHHCCCCHHHHH
T ss_conf             8897254044---2577633554023205-----9999742413168872214440-134430376303557