HHsearch alignment of GI: 254780625 and MMDB domain: 3i1m_M_1-63
>3i1m_M (M:1-63) 30S ribosomal protein S13; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M 2qal_M* 1p6g_M 1p87_M 2aw7_M 2avy_M 2i2u_M 2i2p_M* 2qan_M* 2qb9_M* 2qbb_M* 2qbd_M ...
Probab=95.97 E-value=0.0038 Score=39.89 Aligned_cols=47 Identities=21% Similarity=0.171 Sum_probs=38.1
Q ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 42100111265435641368999999871787783122220010158999999998
Q gi|254780625|r 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 (289)
Q Consensus 165 ~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~ 220 (289)
.+|.-+| +.|-|||.-.|.+||..++|||..++++||++| +.+|-+.
T Consensus 13 K~v~~aL---t~i~GIG~~~A~~Ic~~~gi~~~~k~~~Lt~~q------i~~l~~~ 59 (63)
T 3i1m_M 13 KHAVIAL---TSIYGVGKTRSKAILAAAGIAEDVKISELSEGQ------IDTLRDE 59 (63)
T ss_dssp SCHHHHG---GGSTTCCHHHHHHHHTTTTCCSSCCSTTCCHHH------HHHHHTT
T ss_pred CEEEEEE---ECEECCCHHHHHHHHHHCCCCCCCCCCCCCHHH------HHHHHHH
T ss_conf 6888875---344573899999999991989642346356999------9999988