HHsearch results for GI: 254780625 and protein with PDBid: 1tdh_A
>1tdh_A NEI endonuclease VIII-like 1; helix two turns helix, zinc-LESS finger, hydrolase; 2.10A {Homo sapiens} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=100.00 E-value=0 Score=416.39 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=202.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCEEEEEEECCEEEEEEEC---------CCCCCC
Q ss_conf 96764367889889998679778899964833265787789997289889999605308999503---------553100
Q gi|254780625|r 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELE---------GNLSII 71 (289)
Q Consensus 1 MPElPEVe~~~~~l~~~l~g~~I~~V~~~~~~~~~~~~~~~~~~L~G~~I~~v~r~GK~l~l~l~---------~~~~L~ 71 (289)
||||||||++++.|++.+.|++|..+.......++.... ...+..+..+.++||+|++.|+ ++.+|+
T Consensus 1 MPELPEVe~v~r~L~~~l~g~~i~~~i~~~~~~~~~~~~----~~~~~~~i~~~~rGK~l~~~l~~~~~~~~~~~~~~L~ 76 (364)
T 1tdh_A 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVP----FESSAYRISASARGKELRLILSPLPGAQPQQEPLALV 76 (364)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCCEEEECEECSSCCSCCCC----CEEEEEEEEEEEETTEEEEEEEECTTCSSCCCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC----CCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCEEE
T ss_conf 971799999999999985797898999814446786554----3566638999963339999943665334457871699
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCCHHHCCCCCCCCCCCCCC--
Q ss_conf 152553279981478542245876633899970688760489998158766410014553010053235655533221--
Q gi|254780625|r 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-- 149 (289)
Q Consensus 72 ~HlgM~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~R~fG~~~~~~~~~~~~~~~l~~lGpD~l~~-- 149 (289)
+||||+|+|++.... ..++|.|+.|.|.++.. ...|+|+|+|+||++++.+. ....+|||||+.
T Consensus 77 ~HLGMsG~~~i~~~~-----~~~kh~h~~~~~~~~~~--~~~L~f~D~RrFG~~~l~~~-------~~~~lGPdpl~~~~ 142 (364)
T 1tdh_A 77 FRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPGP--RLALCFVDIRRFGRWDLGGK-------WQPGRGPCVLQEYQ 142 (364)
T ss_dssp EECTTTCEEEEEEGG-----GCCTTEEEEEEBCSSSS--CEEEEEECTTCCCEEEESSC-------CCTTCCCCTTTCHH
T ss_pred EECCCCEEEEECCCC-----CCCCCCEEEEEEECCCC--EEEEEEECCCCCEEEEECCC-------HHHHCCCCCCCCCC
T ss_conf 977872699961688-----78977559999927998--48999955411203563140-------56652976566544
Q ss_pred CCHHHHHHHHHH-CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH--------------HHHH
Q ss_conf 110678887420-1454210011126543564136899999987178778312222001015--------------8999
Q gi|254780625|r 150 SFNAIYLTHQFH-KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP--------------KDIL 214 (289)
Q Consensus 150 ~~~~~~~~~~l~-~~~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~--------------~~~~ 214 (289)
.|+...+...+. .++++||++||||++||||||||+|||||+|+|||.+++++|++++... +..+
T Consensus 143 ~f~~~~~~~~~~k~~~~~IK~~LLDQ~iiaGIGNIYadEiLf~A~IhP~r~a~~ls~~~~~~~~~~~~~l~~~~r~k~~~ 222 (364)
T 1tdh_A 143 QFRESVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQN 222 (364)
T ss_dssp HHHHHHHHTTTSGGGGSBHHHHTTCTTTSTTCCHHHHHHHHHHHTCCTTSBHHHHHGGGC-----CCSCHHHHHHHTTTS
T ss_pred CCCHHHHHHHHHHCCCCCHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 41099999987521576089987247702254288999999984899667412345766413442110033444557788
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCC
Q ss_conf 99999878876765421887553111677877874133166573877107877887899998781206387767
Q gi|254780625|r 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 (289)
Q Consensus 215 ~~L~~~i~~vl~~a~~~gG~~~~~~~~~~g~~g~~~~~~~vy~r~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQ 288 (289)
..|+++++.||.+||+.||++.+++....| .|+|+++|.||||+|++|. +| -+||++|||+.|+
T Consensus 223 ~~l~~~~~~Vl~~ai~~GG~s~~~~~g~~g-~g~Fq~~l~vYgr~g~~Cl-~~--------~~Grt~~~~~~~~ 286 (364)
T 1tdh_A 223 PDLLELCHSVPKEVVQLGGRGYGSESGEED-FAAFRAWLRCYGMPGMSSL-QD--------RHGRTIWFQGDPG 286 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTSSCHHHH-HHHHHHHCSSTTCTTCEEE-EC--------TTSCEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCHHHHCEEECCCCCCCCC-CC--------CCCCEEEECCCCC
T ss_conf 999999999999999818987658878776-1004433841378998244-16--------8997898688886