HHsearch results for GI: 254780625 and protein with PDBid: 2zkq_m
>2zkq_m 40S ribosomal protein S18E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1h_M 3jyv_M*
Probab=95.57 E-value=0.013 Score=35.41 Aligned_cols=50 Identities=18% Similarity=0.390 Sum_probs=41.0
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 54210011126543564136899999987178778312222001015899999999878
Q gi|254780625|r 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 (289)
Q Consensus 164 ~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~ 222 (289)
+.+|.-+| +.|-|||...|..||-.++|+|..++.+||++| +..|-+.+.
T Consensus 23 ~K~v~~aL---t~I~GIG~~~A~~Ic~~lgI~~~~kvg~Lt~~q------l~kl~~~I~ 72 (152)
T 2zkq_m 23 RRKIAFAI---TAIKGVGRRYAHVVLRKADIDLTKRAGELTEDE------VERVITIMQ 72 (152)
T ss_dssp SSBHHHHG---GGSTTCCHHHHHHHHHHHTCCTTSBTTTSCHHH------HHHHHHHHH
T ss_pred CCEEEEEE---ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHH------HHHHHHHHH
T ss_conf 97887650---021065899999999993899543015199999------999999985