HHSEARCH alignment of GI: 254780625 and SCOP domain: d1ee8a3

Alignment

Probab=99.57  E-value=5.9e-16  Score=119.63  Aligned_cols=52  Identities=44%  Similarity=0.890  Sum_probs=50.4

Q ss_pred             CCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCC
Q ss_conf             31116778778741331665738771078778878999987812063877679
Q gi|254780625|r  237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK  289 (289)
Q Consensus       237 ~~~~~~~g~~g~~~~~~~vy~r~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQk  289 (289)
                      +||++++|+.|+|++.|+||+|+|++| ++||++|++++++||+|||||.|||
T Consensus         2 r~y~~~~G~~G~fq~~~~VY~r~g~~C-~~C~~~I~~~~~~~R~t~~Cp~CQ~   53 (56)
T d1ee8a3           2 QSYRQPDGLPGGFQTRHAVYGREGLPC-PACGRPVERRVVAGRGTHFCPTCQG   53 (56)
T ss_dssp             CCCCCTTSCCCSCGGGCSSTTCTTSBC-TTTCCBCEEEESSSCEEEECTTTTT
T ss_pred             CCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCCEEEEEEECCCCCEECCCCCC
T ss_conf             785678998774942489864888633-5499637899998975889957427

SCOP domain information

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: C-terminal, Zn-finger domain of MutM-like DNA repair proteins
domain: DNA repair protein MutM (Fpg)
species: Thermus thermophilus [TaxId: 274]