HHSEARCH alignment of GI: 254780625 and SCOP domain: d1r2za1

Alignment
>d1r2za1 a.156.1.2 (A:135-228) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.96  E-value=1.4e-30  Score=213.51  Aligned_cols=94  Identities=38%  Similarity=0.621  Sum_probs=91.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             55332211106788874201454210011126543564136899999987178778312222001015899999999878
Q gi|254780625|r  143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ  222 (289)
Q Consensus       143 GpD~l~~~~~~~~~~~~l~~~~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~  222 (289)
                      |||||+++|+.+.|.+.+++++++||++||||+++|||||||+|||||+|||||++++++|+++|      +++|+++++
T Consensus         1 GPDpL~~~~~~~~~~~~l~~~~~~ik~~LlDQ~~~aGiGN~y~~EiLf~a~I~P~~~~~~Ls~~e------~~~L~~~~~   74 (94)
T d1r2za1           1 GPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMV   74 (94)
T ss_dssp             CCCTTSTTSCHHHHHHHHTTCCSBHHHHHHCTTTSSSCCHHHHHHHHHHHTCCTTSBGGGCCHHH------HHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHH
T ss_conf             99999986899999999865886289999836545786508999999999726641497866779------999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCC
Q ss_conf             87676542188755311167
Q gi|254780625|r  223 KVLIDAIDAGGSSLRDYVHI  242 (289)
Q Consensus       223 ~vl~~a~~~gG~~~~~~~~~  242 (289)
                      +||..|++.||+|++||+|+
T Consensus        75 ~vl~~ai~~gG~t~~dy~nt   94 (94)
T d1r2za1          75 ATIGEAVMKGGSTVRTYVNT   94 (94)
T ss_dssp             HHHHHHHHTTCCCSSSCCCT
T ss_pred             HHHHHHHHCCCCCHHHHCCC
T ss_conf             99999999599888874385


SCOP domain information

class: All alpha proteins
fold: S13-like H2TH domain
superfamily: S13-like H2TH domain
family: Middle domain of MutM-like DNA repair proteins
domain: DNA repair protein MutM (Fpg)
species: Bacillus stearothermophilus [TaxId: 1422]