HHSEARCH alignment of GI: 254780625 and SCOP domain: d2gy9m1

Alignment
>d2gy9m1 a.156.1.1 (M:1-114) Ribosomal protein S13 {Escherichia coli [TaxId: 562]}
Probab=95.78  E-value=0.0058  Score=36.15  Aligned_cols=50  Identities=20%  Similarity=0.188  Sum_probs=40.4

Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             54210011126543564136899999987178778312222001015899999999878
Q gi|254780625|r  164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ  222 (289)
Q Consensus       164 ~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~  222 (289)
                      +.+|.-+|   +.|=|||...+..||..++|+|..++.+||++|      +..|-+.+.
T Consensus        11 ~K~v~~AL---t~I~GIG~~~A~~Ic~~lgid~~~kv~~Lt~~q------i~~l~~~i~   60 (114)
T d2gy9m1          11 HKHAVIAL---TSIYGVGKTRSKAILAAAGIAEDVKISELSEGQ------IDTLRDEVA   60 (114)
T ss_dssp             SSBHHHHH---TTSSSCCHHHHHHHHHHHTCCTTSBTTSCCHHH------HHHHHHHHH
T ss_pred             CCEEEEEE---EEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHH------HHHHHHHHH
T ss_conf             97888872---315684899999999981989531357456999------999999987


SCOP domain information

class: All alpha proteins
fold: S13-like H2TH domain
superfamily: S13-like H2TH domain
family: Ribosomal protein S13
domain: Ribosomal protein S13
species: Escherichia coli [TaxId: 562]