PSIBLAST alignment of GI: 254780625 and protein with PDB id: 1kfv

>gi|21730465|pdb|1KFV|A Chain A, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna. Length = 271
>gi|21730466|pdb|1KFV|B Chain B, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna Length = 271

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 99/287 (34%), Positives = 138/287 (48%), Gaps = 18/287 (6%)

Query: 3   ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62
           ELPEVE +RR L   +    +  I                    GK I  +SRR KYL+ 
Sbjct: 2   ELPEVETVRRELEKRIVGQKIISIEATYPRXVLTGFEQLKKELTGKTIQGISRRGKYLIF 61

Query: 63  ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122
           E+  +  +I HL   G + +      +      H+H+T    +        +IY D R+F
Sbjct: 62  EIGDDFRLISHLRXEGKYRLATLDAPREK----HDHLTXKFADGQ------LIYADVRKF 111

Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182
           G  +L+ T     Y   + +GPEP    F+      +  K    +K  LL Q +VAG+GN
Sbjct: 112 GTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGN 171

Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242
           IYV E LW AK+ P ++T  LI++       ++ L   I ++L  AI  GGSS+R Y   
Sbjct: 172 IYVDEVLWLAKIHPEKETNQLIES------SIHLLHDSIIEILQKAIKLGGSSIRTY-SA 224

Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289
            GS G  QN   VYGKTGE C S CG  I++I  AGR T +C  CQ+
Sbjct: 225 LGSTGKXQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270