PSIBLAST alignment of GI: 254780625 and protein with PDB id: 2f5n

>gi|93279440|pdb|2F5N|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair Ic1 Length = 274
>gi|93279443|pdb|2F5O|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling G:c Base Pair Ic3 Length = 274
 Score =  209 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 19/291 (6%)

Query: 1   MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58
           MPELPEVE IRR L+ ++   T+ D+ +   N+         F+A   G+ +  + RR K
Sbjct: 1   MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60

Query: 59  YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118
           +L   L    ++I HL M G + +             H HV    T+ +      + Y D
Sbjct: 61  FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110

Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178
            R+FG M +       + PPL  LGPEP   +F+   L  +  K   ++K  LL+  +VA
Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 170

Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238
           G GNIYV E+L+RA + P R   SL          + +L +E+   + +A+  GGS++R 
Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224

Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289
           YV+  G  G FQ+   VYG+ G PC   CG  I + V AGR T YC  CQ+
Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274