RPSBLAST alignment of GI: 254780625 and protein with PDBid: 1k3x

>1k3x_A Endonuclease VIII; hydrolase/DNA; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A* Length = 262

 Score =  189 bits (481), Expect = 5e-49
 Identities = 58/290 (20%), Positives = 107/290 (36%), Gaps = 32/290 (11%)

Query: 2   PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61
           PE PE+     NL   +K   +TD+      L+      + +   G+ +  V  R K LL
Sbjct: 1   PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKT-----YQSQLIGQHVTHVETRGKALL 55

Query: 62  IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121
                +L++  H  + G + +  T      +  +   V +   + T              
Sbjct: 56  THFSNDLTLYSHNQLYGVWRVVDTGE--EPQTTRVLRVKLQTADKTI---------LLYS 104

Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKIVA 178
              ++++       +P L+ +GP+  D +     +  +      +N      LL+Q  +A
Sbjct: 105 ASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLA 164

Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238
           G+GN    E LW+  L+   K + L             L   + ++   +    G    +
Sbjct: 165 GLGNYLRVEILWQVGLTGNHKAKDLNAAQL------DALAHALLEIPRFSYATRGQVDEN 218

Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288
             H     G     F V+ + GEPC   CG +I +   + R  ++C  CQ
Sbjct: 219 KHH-----GALFR-FKVFHRDGEPCE-RCGSIIEKTTLSSRPFYWCPGCQ 261