RPSBLAST alignment of GI: 254780625 and protein with PDBid: 1tdh

>1tdh_A NEI endonuclease VIII-like 1; helix two turns helix, zinc-LESS finger, hydrolase; 2.10A {Homo sapiens} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 Length = 364

 Score =  193 bits (490), Expect = 5e-50
 Identities = 61/313 (19%), Positives = 97/313 (30%), Gaps = 50/313 (15%)

Query: 1   MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60
           MPE PE+ +  + +    + +            R                I  S R K L
Sbjct: 1   MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPF----ESSAYRISASARGKEL 56

Query: 61  LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111
            + L            L+++   GMSGSF +           P+H H+            
Sbjct: 57  RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPREEL-----PRHAHLRFYTAPPGPRLA 111

Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNA 170
               + D RRFG  DL       + P             F    L +   K  +  +  A
Sbjct: 112 LC--FVDIRRFGRWDLGGKWQPGRGPC-----VLQEYQQFRESVLRNLADKAFDRPICEA 164

Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ--------------NNGTPKDILYK 216
           LL+Q+   GIGN    E L+R K+ P  K RS+++                   K     
Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPD 224

Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276
           L++    V  + +  GG         +     F+     YG  G   L +         +
Sbjct: 225 LLELCHSVPKEVVQLGGRGYGSESGEEDF-AAFRAWLRCYGMPGMSSLQD---------R 274

Query: 277 AGRSTFYCTYCQK 289
            GR+ ++      
Sbjct: 275 HGRTIWFQGDPGP 287