RPSBLAST alignment of GI: 254780625 and SCOP domain: d2hkja1

Alignment

 Score = 54.9 bits (132), Expect = 7e-09
 Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 8/83 (9%)

Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202
            P P     +   +    +    +             IG+    + L  A L P +K ++
Sbjct: 2   KPHP--YGVDREEIKILINNLKRDYTIKEFLVNEFQSIGDTTADKILELAGLKPNKKVKN 59

Query: 203 LIQNNGTPKDILYKLIQEIQKVL 225
           L     T ++I  +L++  +K  
Sbjct: 60  L-----TEEEIT-RLVETFKKYE 76

SCOP domain information

class: All alpha proteins
fold: S13-like H2TH domain
superfamily: S13-like H2TH domain
family: Topoisomerase VI-B subunit middle domain
domain: Topoisomerase VI-B subunit middle domain
species: Archaeon Sulfolobus shibatae [TaxId: 2286]