HHsearch alignment for GI: 254780626 and conserved domain: PRK00239

>PRK00239 rpsT 30S ribosomal protein S20; Reviewed.
Probab=99.95  E-value=6.7e-28  Score=187.42  Aligned_cols=88  Identities=44%  Similarity=0.583  Sum_probs=86.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             96898999999999999999999999999999999999960898999999999999999998658861669999999999
Q gi|254780626|r    1 MANKDSAKKMIRKIARRTLINKSRRSSVRSFMRHANEAITFGKIEEATEACRKAESVIQKAKSKGIFHGNAASRKVSRLS   80 (90)
Q Consensus         1 Man~kSa~Kr~r~~~krr~~N~~~ks~~kt~iKk~~~ai~~~d~~~a~~~~~~~~s~lDka~kkgiihkn~AsRkKSrL~   80 (90)
T Consensus         1 Man~kSA~Kr~rq~~krr~~N~~~ks~~kT~iKk~~~ai~~~d~~~a~~~~~~~~s~iDkaa~kgiihkN~AaRkKSrL~   80 (88)
T PRK00239          1 MANIKSAKKRIRQNEKRRLRNKSRKSRLRTAIKKVRAAIEAGDKEAAEEALKAAQSKLDKAASKGVIHKNKAARKKSRLA   80 (88)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             99808889999999999999999999999999999999984899999999999999999998669876315889999999


Q ss_pred             HHHHHHHH
Q ss_conf             99999842
Q gi|254780626|r   81 KRLKGILT   88 (90)
Q Consensus        81 ~~v~~~~~   88 (90)
T Consensus        81 k~ln~l~~   88 (88)
T PRK00239         81 AKVNALAA   88 (88)
T ss_pred             HHHHHHCC
T ss_conf             99977639