HHsearch alignment of GI: 254780626 and MMDB domain: 3i1m_T_

>3i1m_T (T:) 30S ribosomal protein S20; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_T* 3e1a_N 3e1c_N 1vs5_T 3i1o_T 3i1q_T 3i1s_T 3i1z_T 3i21_T 2qal_T* 1p6g_T 1p87_T 2aw7_T 2avy_T 2i2u_T 2i2p_T* 2qan_T* 2qb9_T* 2qbb_T* 2qbd_T ...
Probab=99.95  E-value=5.8e-28  Score=187.41  Aligned_cols=87  Identities=30%  Similarity=0.445  Sum_probs=85.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             96898999999999999999999999999999999999960898999999999999999998658861669999999999
Q gi|254780626|r    1 MANKDSAKKMIRKIARRTLINKSRRSSVRSFMRHANEAITFGKIEEATEACRKAESVIQKAKSKGIFHGNAASRKVSRLS   80 (90)
Q Consensus         1 Man~kSa~Kr~r~~~krr~~N~~~ks~~kt~iKk~~~ai~~~d~~~a~~~~~~~~s~lDka~kkgiihkn~AsRkKSrL~   80 (90)
                      ||||+|++||+||+++++++|++++|.+||++|+|+.+|++||.+++.++|+.++|.||+++++||||+|+|+|++|||+
T Consensus         1 MaN~kSa~KR~r~~~krr~~N~~~kS~~kT~iKk~~~ai~~~d~~~a~~~l~~a~s~iDkaa~KgviHkN~AaRkKSRL~   80 (87)
T 3i1m_T            1 MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLT   80 (87)
T ss_dssp             --CCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTSSTTHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             99818899999999999999999999999999999999983888999999999999999999769766668889999999


Q ss_pred             HHHHHHH
Q ss_conf             9999984
Q gi|254780626|r   81 KRLKGIL   87 (90)
Q Consensus        81 ~~v~~~~   87 (90)
                      +.++++.
T Consensus        81 ~~~n~~a   87 (87)
T 3i1m_T           81 AQINKLA   87 (87)
T ss_dssp             HHHTTCC
T ss_pred             HHHHHCC
T ss_conf             9987609