HHsearch results for GI: 254780626 and protein with PDBid: 2vqe_T
>2vqe_T 30S ribosomal protein S20; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.7.6.1 PDB: 1gix_W* 1hnw_T* 1hnx_T* 1hnz_T* 1hr0_T 1j5e_T 1jgo_W* 1jgp_W* 1jgq_W* 1ml5_W* 1yl4_W 2b64_T* 2b9m_T* 2b9o_T* 2f4v_T* 2ow8_u* 2qnh_u* 2uxb_T* 1fjg_T* 2uxd_T* ...
Probab=99.95 E-value=6e-28 Score=186.38 Aligned_cols=90 Identities=37% Similarity=0.470 Sum_probs=88.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 96898999999999999999999999999999999999960898999999999999999998658861669999999999
Q gi|254780626|r 1 MANKDSAKKMIRKIARRTLINKSRRSSVRSFMRHANEAITFGKIEEATEACRKAESVIQKAKSKGIFHGNAASRKVSRLS 80 (90)
Q Consensus 1 Man~kSa~Kr~r~~~krr~~N~~~ks~~kt~iKk~~~ai~~~d~~~a~~~~~~~~s~lDka~kkgiihkn~AsRkKSrL~ 80 (90)
|+||+||+||+||+++++++|++++|.+||++|+|+.+|++||.+++.++|+.+++.||+++++||||+|+|+|+||||+
T Consensus 6 ~an~~SA~KRiRq~~krr~rN~~~kS~~kT~iKk~~~Ai~~~d~~~a~~~l~~a~s~iDKAa~KgviHkN~AaRkKSRL~ 85 (106)
T 2vqe_T 6 PKRNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLM 85 (106)
T ss_dssp --CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSSCTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 67886289999999999999999999999999999999982789999999999999999998679876214889999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999984269
Q gi|254780626|r 81 KRLKGILTSA 90 (90)
Q Consensus 81 ~~v~~~~~~A 90 (90)
++|+++..++
T Consensus 86 k~vn~l~~~a 95 (106)
T 2vqe_T 86 RKVRQLLEAA 95 (106)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHH
T ss_conf 9999887400