HHsearch alignment for GI: 254780627 and conserved domain: CHL00060
>CHL00060 atpB ATP synthase CF1 beta subunit.
Probab=95.22 E-value=0.017 Score=37.79 Aligned_cols=39 Identities=23% Similarity=0.242 Sum_probs=29.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
Q ss_conf 898627888857999999999986306881686469888
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYF 237 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F 237 (502)
T Consensus 158 igIfggaGvGKTvLl~eli~niak~~~~v~V~a~IGER~ 196 (480)
T CHL00060 158 IGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 196 (480)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 876568998878999999961200379889999966773