HHsearch alignment for GI: 254780627 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=891.55 Aligned_cols=406 Identities=47% Similarity=0.760 Sum_probs=378.4
Q ss_pred HHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
Q ss_conf 99999999986697889743024057885399898983898999999998999999999986277665078972145555
Q gi|254780627|r 39 FTIVSSRLKNQVGPDVYASWFQRLKFHSVLHNIVHLSVPTNFLKAWIKNRYLETITKLFQEEHSRIQGVEILVRSVALPS 118 (502)
Q Consensus 39 W~~il~~Lk~~l~~~~F~tWi~pL~~i~~e~~~L~L~vPn~FikdwIe~~Y~~~I~~al~~~~g~~~~I~i~i~~~~~~~ 118 (502)
T Consensus 1 w~~~l~~l~~~~~~~~~~~w~~~~~~---~~~~~~i~~pn~f~~~~~~~~-~~~i~~~~~~~~~-~~~~~--~~------ 67 (408)
T COG0593 1 WERVLARLKKELGETEFESWIRPLKV---EESVLVLYAPNEFVRNWLNSK-LDLIKELLQELDG-IIKVE--VR------ 67 (408)
T ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHH-HHHHHHHHHHHCC-CCCEE--EC------
T ss_conf 95899999986286679999988533---432499996968999999960-8999999998358-75144--24------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
Q ss_conf 55555665544447533223222123554444543445576447887632886147899999999824100136555554
Q gi|254780627|r 119 VEKTASSPSITKLSPINTNISKSPIILGKQTISPVFGSPLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNP 198 (502)
Q Consensus 119 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~LNpryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NP 198 (502)
T Consensus 68 -----------~~~~-------~---------q~~~~~~l~~~ytFdnFv~g~~N~~A~aa~~~va~~~g~~-----~np 115 (408)
T COG0593 68 -----------ASAP-------A---------QLPLPSGLNPKYTFDNFVVGPSNRLAYAAAKAVAENPGGA-----YNP 115 (408)
T ss_pred -----------CCCC-------C---------CCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHCCCCC-----CCC
T ss_conf -----------5553-------1---------3566556898885542204774499999999987566886-----895
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC-CHH
Q ss_conf 8986278888579999999999863068816864698889999999861988999999740310205444453175-069
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK-LIQ 277 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk-~tq 277 (502)
T Consensus 116 lfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~v~a~~~~~~~~Fk~~y-~~dlllIDDiq~l~gk~~~q 194 (408)
T COG0593 116 LFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDFVKALRDNEMEKFKEKY-SLDLLLIDDIQFLAGKERTQ 194 (408)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEECHHHHHCCCHHHH
T ss_conf 79987999978999999999998629986488504899899999998850488888764-26735551386756771579
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 99999999988569879996487567613630345765302115775158889999999999988643116897898999
Q gi|254780627|r 278 HEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVL 357 (502)
Q Consensus 278 ee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~ 357 (502)
T Consensus 195 eefFh~FN~l~~~~kqIvltsdr~P~~l~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~aiL~kk-----a~~~~~~i~~ev~ 269 (408)
T COG0593 195 EEFFHTFNALLENGKQIVLTSDRPPKELNGLEDRLRSRLEWGLVVEIEPPDDETRLAILRKK-----AEDRGIEIPDEVL 269 (408)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHH-----HHHCCCCCCHHHH
T ss_conf 99999999888508879997078832211035889989863057752798889999999999-----9865888887999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf 9998502788899999999999986302-468778899999876303788757989999999998099999940888774
Q gi|254780627|r 358 MHVARTVTTSGRELDGAFNQLVFRHSFA-PILTAEIADELLSHLVNTGETKKMRIEDIQRMVAKHYNISRNDLLSNRRVR 436 (502)
Q Consensus 358 ~~la~~~~~~vR~Legal~~l~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~i~~~~I~~~V~~~~~i~~~~l~s~~R~~ 436 (502)
T Consensus 270 ~~la~~~~~nvReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~~~~~~~-~-itie~I~~~Va~~y~v~~~dl~s~~R~~ 347 (408)
T COG0593 270 EFLAKRLDRNVRELEGALNRLDAFALFTKRAITIDLVKEILKDLLRAGE-K-ITIEDIQKIVAEYYNVKVSDLLSKSRTR 347 (408)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-C-CCHHHHHHHHHHHHCCCHHHHHCCCCCC
T ss_conf 9999970030999999999999999853875769999999998640145-5-8999999999988498899962456662
Q ss_pred HHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 01445799999999851568789998847984379999999999998616999999999998
Q gi|254780627|r 437 TVVRPRQVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLHAVRKVEKMLETDITLKKEVELLKR 498 (502)
Q Consensus 437 ~i~~~RqiamyL~r~~t~~s~~~IG~~fg~rdHsTV~~a~~ki~~~~~~d~~~~~~i~~i~~ 498 (502)
T Consensus 348 ~i~~~RqiamyL~r~lt~~Slp~IG~~Fg-rdHtTV~~a~~kI~~~~~~d~~l~~~i~~l~~ 408 (408)
T COG0593 348 NIVRPRQIAMYLARELTNLSLPEIGKAFG-RDHTTVLHAVRKIEQLIEEDDSLKEEIELLKR 408 (408)
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf 34319999999999871376899999858-98409999999999998658889999999639