HHsearch alignment for GI: 254780627 and conserved domain: COG0593

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=100.00  E-value=0  Score=891.55  Aligned_cols=406  Identities=47%  Similarity=0.760  Sum_probs=378.4

Q ss_pred             HHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
Q ss_conf             99999999986697889743024057885399898983898999999998999999999986277665078972145555
Q gi|254780627|r   39 FTIVSSRLKNQVGPDVYASWFQRLKFHSVLHNIVHLSVPTNFLKAWIKNRYLETITKLFQEEHSRIQGVEILVRSVALPS  118 (502)
Q Consensus        39 W~~il~~Lk~~l~~~~F~tWi~pL~~i~~e~~~L~L~vPn~FikdwIe~~Y~~~I~~al~~~~g~~~~I~i~i~~~~~~~  118 (502)
T Consensus         1 w~~~l~~l~~~~~~~~~~~w~~~~~~---~~~~~~i~~pn~f~~~~~~~~-~~~i~~~~~~~~~-~~~~~--~~------   67 (408)
T COG0593           1 WERVLARLKKELGETEFESWIRPLKV---EESVLVLYAPNEFVRNWLNSK-LDLIKELLQELDG-IIKVE--VR------   67 (408)
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHHC---CCCEEEEEECCHHHHHHHHHH-HHHHHHHHHHHCC-CCCEE--EC------
T ss_conf             95899999986286679999988533---432499996968999999960-8999999998358-75144--24------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
Q ss_conf             55555665544447533223222123554444543445576447887632886147899999999824100136555554
Q gi|254780627|r  119 VEKTASSPSITKLSPINTNISKSPIILGKQTISPVFGSPLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNP  198 (502)
Q Consensus       119 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~LNpryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NP  198 (502)
T Consensus        68 -----------~~~~-------~---------q~~~~~~l~~~ytFdnFv~g~~N~~A~aa~~~va~~~g~~-----~np  115 (408)
T COG0593          68 -----------ASAP-------A---------QLPLPSGLNPKYTFDNFVVGPSNRLAYAAAKAVAENPGGA-----YNP  115 (408)
T ss_pred             -----------CCCC-------C---------CCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHCCCCC-----CCC
T ss_conf             -----------5553-------1---------3566556898885542204774499999999987566886-----895


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC-CHH
Q ss_conf             8986278888579999999999863068816864698889999999861988999999740310205444453175-069
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK-LIQ  277 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk-~tq  277 (502)
T Consensus       116 lfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~v~a~~~~~~~~Fk~~y-~~dlllIDDiq~l~gk~~~q  194 (408)
T COG0593         116 LFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDFVKALRDNEMEKFKEKY-SLDLLLIDDIQFLAGKERTQ  194 (408)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEECHHHHHCCCHHHH
T ss_conf             79987999978999999999998629986488504899899999998850488888764-26735551386756771579


Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             99999999988569879996487567613630345765302115775158889999999999988643116897898999
Q gi|254780627|r  278 HEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVL  357 (502)
Q Consensus       278 ee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~  357 (502)
T Consensus       195 eefFh~FN~l~~~~kqIvltsdr~P~~l~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~aiL~kk-----a~~~~~~i~~ev~  269 (408)
T COG0593         195 EEFFHTFNALLENGKQIVLTSDRPPKELNGLEDRLRSRLEWGLVVEIEPPDDETRLAILRKK-----AEDRGIEIPDEVL  269 (408)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHH-----HHHCCCCCCHHHH
T ss_conf             99999999888508879997078832211035889989863057752798889999999999-----9865888887999


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCH
Q ss_conf             9998502788899999999999986302-468778899999876303788757989999999998099999940888774
Q gi|254780627|r  358 MHVARTVTTSGRELDGAFNQLVFRHSFA-PILTAEIADELLSHLVNTGETKKMRIEDIQRMVAKHYNISRNDLLSNRRVR  436 (502)
Q Consensus       358 ~~la~~~~~~vR~Legal~~l~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~i~~~~I~~~V~~~~~i~~~~l~s~~R~~  436 (502)
T Consensus       270 ~~la~~~~~nvReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~~~~~~~-~-itie~I~~~Va~~y~v~~~dl~s~~R~~  347 (408)
T COG0593         270 EFLAKRLDRNVRELEGALNRLDAFALFTKRAITIDLVKEILKDLLRAGE-K-ITIEDIQKIVAEYYNVKVSDLLSKSRTR  347 (408)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-C-CCHHHHHHHHHHHHCCCHHHHHCCCCCC
T ss_conf             9999970030999999999999999853875769999999998640145-5-8999999999988498899962456662


Q ss_pred             HHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             01445799999999851568789998847984379999999999998616999999999998
Q gi|254780627|r  437 TVVRPRQVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLHAVRKVEKMLETDITLKKEVELLKR  498 (502)
Q Consensus       437 ~i~~~RqiamyL~r~~t~~s~~~IG~~fg~rdHsTV~~a~~ki~~~~~~d~~~~~~i~~i~~  498 (502)
T Consensus       348 ~i~~~RqiamyL~r~lt~~Slp~IG~~Fg-rdHtTV~~a~~kI~~~~~~d~~l~~~i~~l~~  408 (408)
T COG0593         348 NIVRPRQIAMYLARELTNLSLPEIGKAFG-RDHTTVLHAVRKIEQLIEEDDSLKEEIELLKR  408 (408)
T ss_pred             CCCHHHHHHHHHHHHHCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf             34319999999999871376899999858-98409999999999998658889999999639