HHsearch alignment for GI: 254780627 and conserved domain: COG1435
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism].
Probab=96.31 E-value=0.012 Score=38.89 Aligned_cols=92 Identities=24% Similarity=0.309 Sum_probs=60.7
Q ss_pred EEEECCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEHH---HHHHHHHHHHHC--------CCHHHHHHHHHH------C
Q ss_conf 898627888857-9999999999863068816864698---889999999861--------988999999740------3
Q gi|254780627|r 199 LFIHASVGLGKT-HLLQAIANASIKRQPNLRVVYLTAE---YFMWRFASAIRD--------NCALNLKDSLRN------I 260 (502)
Q Consensus 199 Lfi~G~~GlGKT-HLl~ai~~~~~~~~~~~~v~y~~~e---~F~~~~~~a~~~--------~~~~~fr~~~r~------~ 260 (502)
T Consensus 7 ~~i~gpM~SGKT~eLl~r~~~~~~~g---~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~~i~~~~~i~~~i~~~~~~~~~ 83 (201)
T COG1435 7 EFIYGPMFSGKTEELLRRARRYKEAG---MKVLVFKPAIDTRYGVGKVSSRIGLSSEAVVIPSDTDIFDEIAALHEKPPV 83 (201)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHCC---CEEEEEECCCCCCCCCCEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCCC
T ss_conf 99971576863599999999999759---808998525335356433653158766535638757899999851347875
Q ss_pred CHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-CCEEEEEC
Q ss_conf 102054444531750699999999998856-98799964
Q gi|254780627|r 261 DLLLIDDMQFLQGKLIQHEFCHLLNSLLDS-AKQVVAAA 298 (502)
Q Consensus 261 DvLliDDiqfl~gk~tqee~f~~~n~l~~~-gkqiv~ts 298 (502)
T Consensus 84 ~~v~IDEaQF~~-----~~~v~~l~~lad~lgi~Vi~~G 117 (201)
T COG1435 84 DCVLIDEAQFFD-----EELVYVLNELADRLGIPVICYG 117 (201)
T ss_pred CEEEEEHHHHCC-----HHHHHHHHHHHHHCCCEEEEEC
T ss_conf 789996167189-----7899999999861498899954