HHsearch alignment for GI: 254780627 and conserved domain: COG1435

>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism].
Probab=96.31  E-value=0.012  Score=38.89  Aligned_cols=92  Identities=24%  Similarity=0.309  Sum_probs=60.7

Q ss_pred             EEEECCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEHH---HHHHHHHHHHHC--------CCHHHHHHHHHH------C
Q ss_conf             898627888857-9999999999863068816864698---889999999861--------988999999740------3
Q gi|254780627|r  199 LFIHASVGLGKT-HLLQAIANASIKRQPNLRVVYLTAE---YFMWRFASAIRD--------NCALNLKDSLRN------I  260 (502)
Q Consensus       199 Lfi~G~~GlGKT-HLl~ai~~~~~~~~~~~~v~y~~~e---~F~~~~~~a~~~--------~~~~~fr~~~r~------~  260 (502)
T Consensus         7 ~~i~gpM~SGKT~eLl~r~~~~~~~g---~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~~i~~~~~i~~~i~~~~~~~~~   83 (201)
T COG1435           7 EFIYGPMFSGKTEELLRRARRYKEAG---MKVLVFKPAIDTRYGVGKVSSRIGLSSEAVVIPSDTDIFDEIAALHEKPPV   83 (201)
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCC---CEEEEEECCCCCCCCCCEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCCC
T ss_conf             99971576863599999999999759---808998525335356433653158766535638757899999851347875


Q ss_pred             CHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-CCEEEEEC
Q ss_conf             102054444531750699999999998856-98799964
Q gi|254780627|r  261 DLLLIDDMQFLQGKLIQHEFCHLLNSLLDS-AKQVVAAA  298 (502)
Q Consensus       261 DvLliDDiqfl~gk~tqee~f~~~n~l~~~-gkqiv~ts  298 (502)
T Consensus        84 ~~v~IDEaQF~~-----~~~v~~l~~lad~lgi~Vi~~G  117 (201)
T COG1435          84 DCVLIDEAQFFD-----EELVYVLNELADRLGIPVICYG  117 (201)
T ss_pred             CEEEEEHHHHCC-----HHHHHHHHHHHHHCCCEEEEEC
T ss_conf             789996167189-----7899999999861498899954