HHsearch alignment for GI: 254780627 and conserved domain: KOG0652

Probab=93.73  E-value=0.18  Score=30.55  Aligned_cols=145  Identities=23%  Similarity=0.356  Sum_probs=72.0

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCC---HHHHH-HHHHHCCHHHHHHHHHHC--
Q ss_conf             898627888857999999999986306881686469888999999986198---89999-997403102054444531--
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNC---ALNLK-DSLRNIDLLLIDDMQFLQ--  272 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~---~~~fr-~~~r~~DvLliDDiqfl~--  272 (502)
T Consensus       208 vLmYGPPGTGKTlmARAcAaqT~a-----TFLKLAgPQLVQMfI---GdGAkLVRDAFaLAKEkaP~IIFIDElDAIGtK  279 (424)
T KOG0652         208 VLMYGPPGTGKTLMARACAAQTNA-----TFLKLAGPQLVQMFI---GDGAKLVRDAFALAKEKAPTIIFIDELDAIGTK  279 (424)
T ss_pred             EEEECCCCCCHHHHHHHHHHHCCC-----HHHHHCCHHHHHHHH---CCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCC
T ss_conf             276579997577999999874010-----688732647776653---341889999998753349838997300232334


Q ss_pred             -------CC-CHHH---HHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHH-H-HHHCCEEEEECCCCHHHHHHHHHHH
Q ss_conf             -------75-0699---99999999885698799964875676136303457-6-5302115775158889999999999
Q gi|254780627|r  273 -------GK-LIQH---EFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIR-S-RLQGGVSVPLGLHDYEMRFSILKNR  339 (502)
Q Consensus       273 -------gk-~tqe---e~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~-S-R~~~Gl~~~i~~Pd~e~r~~Il~~k  339 (502)
T Consensus       280 RfDSek~GDREVQRTMLELLNQLDGFss~~~vKviAATNR---vDiLDPALlRSGRLDR--KIEfP~Pne~aRarIlQIH  354 (424)
T KOG0652         280 RFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNR---VDILDPALLRSGRLDR--KIEFPHPNEEARARILQIH  354 (424)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC---CCCCCHHHHHCCCCCC--CCCCCCCCHHHHHHHHHHH
T ss_conf             3653123438999999999986048997562678852164---3434888864466444--4348899778988999886


Q ss_pred             HHHHHHHCCCCCCCHHH-HHHHHHH
Q ss_conf             98864311689789899-9999850
Q gi|254780627|r  340 LAISQKEDPKLNINEEV-LMHVART  363 (502)
Q Consensus       340 ~~~~~~~~~~~~l~~~v-~~~la~~  363 (502)
T Consensus       355 -------sRKMnv~~DvNfeELaRs  372 (424)
T KOG0652         355 -------SRKMNVSDDVNFEELARS  372 (424)
T ss_pred             -------HHCCCCCCCCCHHHHHHC
T ss_conf             -------400577888798998533