HHsearch alignment for GI: 254780627 and conserved domain: PRK00149
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=100.00 E-value=0 Score=1049.08 Aligned_cols=445 Identities=41% Similarity=0.664 Sum_probs=407.2
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
Q ss_conf 89999999999998669788974302405788539989898389899999999899999999998627766507897214
Q gi|254780627|r 35 CESIFTIVSSRLKNQVGPDVYASWFQRLKFHSVLHNIVHLSVPTNFLKAWIKNRYLETITKLFQEEHSRIQGVEILVRSV 114 (502)
Q Consensus 35 ~~~iW~~il~~Lk~~l~~~~F~tWi~pL~~i~~e~~~L~L~vPn~FikdwIe~~Y~~~I~~al~~~~g~~~~I~i~i~~~ 114 (502)
T Consensus 1 ~~~iW~~il~~Lk~~l~~~~f~~Wf~pl~~~~~~~~~l~l~vPn~F~~~wI~~~y~~~I~~~l~~~~g~~~~I~~~v~~~ 80 (447)
T PRK00149 1 LKELWQQVLELLKDELSEPEYETWIKPLKLEKSSDDTLVLSAPNRFVKDWIESNYLDLILELLSEVTGAKISVEFVVGEK 80 (447)
T ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 97899999999987689999999986596768669999999797589999999999999999999639985289997887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 55555555566554444753322322212355444454344557644788763288614789999999982410013655
Q gi|254780627|r 115 ALPSVEKTASSPSITKLSPINTNISKSPIILGKQTISPVFGSPLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTV 194 (502)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~LNpryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~ 194 (502)
T Consensus 81 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~Ln~~yTFdnFVvG~sN~lA~aAA~~Va~~pg~~---- 144 (447)
T PRK00149 81 PSSEEPAAAVTAA------------AAAPAATAATPADNFRSNLNPKYTFDNFVVGKSNRLAHAAALAVAENPGKA---- 144 (447)
T ss_pred CCCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCC----
T ss_conf 6666666655555------------555556566555445678885560326222698599999999998376767----
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf 55548986278888579999999999863068816864698889999999861988999999740310205444453175
Q gi|254780627|r 195 RLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK 274 (502)
Q Consensus 195 ~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk 274 (502)
T Consensus 145 -yNPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~tae~F~~~~v~al~~~~~~~Fr~~yr~~DvLliDDiqfl~gk 223 (447)
T PRK00149 145 -YNPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSSEKFTNDFVKALRNNAMEEFKEKYRSVDVLLIDDIQFLAGK 223 (447)
T ss_pred -CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECHHHHHHCC
T ss_conf -7855897799887889999999999985899728995499999999999851869999999972885432148886055
Q ss_pred -CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf -0699999999998856987999648756761363034576530211577515888999999999998864311689789
Q gi|254780627|r 275 -LIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNIN 353 (502)
Q Consensus 275 -~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~ 353 (502)
T Consensus 224 ~~tqeeff~~fn~l~~~~kqiv~tsd~~P~~l~~l~~rL~SRf~~Gl~~~i~~Pd~e~r~~Il~~k~~-----~~~~~l~ 298 (447)
T PRK00149 224 EKTQEEFFHTFNALHENNKQIVITSDRPPKELEGLEDRLRSRFEWGLTVDIEPPDLETRVAILQKKAE-----EEGINLP 298 (447)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH-----HCCCCCC
T ss_conf 77999999999999984996899578896765651177886763762651059999999999999999-----7289999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCC
Q ss_conf 8999999850278889999999999998630-246877889999987630378875798999999999809999994088
Q gi|254780627|r 354 EEVLMHVARTVTTSGRELDGAFNQLVFRHSF-APILTAEIADELLSHLVNTGETKKMRIEDIQRMVAKHYNISRNDLLSN 432 (502)
Q Consensus 354 ~~v~~~la~~~~~~vR~Legal~~l~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~i~~~~I~~~V~~~~~i~~~~l~s~ 432 (502)
T Consensus 299 ~~v~~~iA~~~~~nvR~LeGal~~l~a~~~~~~~~i~~~~~~~~l~~~~~~-~~~~it~~~I~~~Va~~f~i~~~dl~s~ 377 (447)
T PRK00149 299 NEVLEFIAKRIRSNIRELEGALNRLVAYASLTGRPITLELAKEALKDLLRL-QKKQITIENIQKVVAEYYNVKVSDLKSK 377 (447)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHCCCHHHHCCC
T ss_conf 899999997126889999999999999999868999999999999987403-6787899999999998809839995378
Q ss_pred CCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
Q ss_conf 8774014457999999998515687899988479843799999999999986169999999999987429
Q gi|254780627|r 433 RRVRTVVRPRQVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLHAVRKVEKMLETDITLKKEVELLKRLISE 502 (502)
Q Consensus 433 ~R~~~i~~~RqiamyL~r~~t~~s~~~IG~~fg~rdHsTV~~a~~ki~~~~~~d~~~~~~i~~i~~~i~~ 502 (502)
T Consensus 378 ~R~~~i~~aRqiamyL~r~~t~~s~~~IG~~Fg~RdHsTVi~a~~ki~~~~~~d~~~~~~i~~l~~~l~~ 447 (447)
T PRK00149 378 RRTRNIARPRQIAMYLAKELTDLSLPEIGEEFGGRDHTTVLHAVRKIEKLIEEDASLKEEIEELKRKLKS 447 (447)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_conf 8884455899999999998858899999998389983399999999999997499999999999998449