HHsearch alignment for GI: 254780627 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=99.43 E-value=3.8e-10 Score=92.09 Aligned_cols=232 Identities=18% Similarity=0.163 Sum_probs=145.5
Q ss_pred CCCCHHHHHHHCCCCCHHHH-HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHH
Q ss_conf 57644788763288614789-99999998241001365555548986278888579999999999863068816864698
Q gi|254780627|r 157 PLDSRFVFSTFIEGSSNRVA-LTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAE 235 (502)
Q Consensus 157 ~LNpryTFDnFVVG~sN~lA-~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e 235 (502)
T Consensus 22 ~L~~~yvP~~l~-~Re~Ei~~l~~~l~~~l~-g~~~-----~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~ 94 (394)
T PRK00411 22 VLEPDYVPENLP-HREEQIEELAFALRPALR-GSRP-----SNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQ 94 (394)
T ss_pred HCCCCCCCCCCC-CHHHHHHHHHHHHHHHHC-CCCC-----CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 379988899898-859999999999999975-9999-----847998899998999999999999974689659999696
Q ss_pred HHH------HHHHHHHHCCC-------HHH----HHHHHH---HCCHHHHHHHHHHCCCCHHHHHHHHHHHHH--HCCCE
Q ss_conf 889------99999986198-------899----999974---031020544445317506999999999988--56987
Q gi|254780627|r 236 YFM------WRFASAIRDNC-------ALN----LKDSLR---NIDLLLIDDMQFLQGKLIQHEFCHLLNSLL--DSAKQ 293 (502)
Q Consensus 236 ~F~------~~~~~a~~~~~-------~~~----fr~~~r---~~DvLliDDiqfl~gk~tqee~f~~~n~l~--~~gkq 293 (502)
T Consensus 95 ~~~t~~~i~~~i~~~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~~~~vLY~L~r~~~~~~~~~~ 174 (394)
T PRK00411 95 IDRTRYAILSEIARSLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVEKEGNDVLYSLLRAHEEYPGARI 174 (394)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCE
T ss_conf 68989999999999956998987787899999999998616697589999655402036650899999854022688738
Q ss_pred -EEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC---CCHH
Q ss_conf -999648756761363034576530211577515888999999999998864311689789899999985027---8889
Q gi|254780627|r 294 -VVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVT---TSGR 369 (502)
Q Consensus 294 -iv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~---~~vR 369 (502)
T Consensus 175 ~vI~IsN-~~~~~~~Ldprv~S~l~~-~~i~F~PY~~~qL~~IL~~R~~~af--~~g-v~~~~~i~~~A~~~a~~~GDaR 249 (394)
T PRK00411 175 GVIGISS-DLTFLYILDPRVKSVFGP-EEIVFPPYTADEIFDILKDRVEEGF--YPG-VVSDEVLELIADLTGREHGDAR 249 (394)
T ss_pred EEEEEEC-CCCHHHHHHHHHHCCCCC-EEEEECCCCHHHHHHHHHHHHHHCC--CCC-CCCHHHHHHHHHHHHHCCCCHH
T ss_conf 9999976-871776640777502786-2898589998999999999998414--556-7897899999999855047589
Q ss_pred HHHHHHHHHHHHHHH-C-CCCCHHHHHHHHHHH
Q ss_conf 999999999998630-2-468778899999876
Q gi|254780627|r 370 ELDGAFNQLVFRHSF-A-PILTAEIADELLSHL 400 (502)
Q Consensus 370 ~Legal~~l~~~~~~-~-~~~~~~~~~~~l~~~ 400 (502)
T Consensus 250 ~Aldllr~A~e~Ae~~g~~~Vt~~hV~~A~~~~ 282 (394)
T PRK00411 250 VAIDLLRRAGEIAEREGSRKVTEEDVRKAYEKS 282 (394)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 999999999999997189965899999999986