HHsearch alignment for GI: 254780627 and conserved domain: PRK05642

Probab=100.00  E-value=0  Score=384.96  Aligned_cols=223  Identities=26%  Similarity=0.330  Sum_probs=200.2

Q ss_pred             CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEH
Q ss_conf             45576447887632886147899999999824100136555554898627888857999999999986306881686469
Q gi|254780627|r  155 GSPLDSRFVFSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTA  234 (502)
Q Consensus       155 ~s~LNpryTFDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~  234 (502)
T Consensus         9 ~~~l~~~~tfdnFi~g-~N~~a~~~~~~l~~~~~~----~~~~~l~i~G~~G~GKTHLL~A~~~~~~~~--~~~~~yl~~   81 (234)
T PRK05642          9 GVRLRDDATFANYYPG-ANAAALGYVERLCEADAG----WTESLIYLWGKDGVGRSHLLQAACLRFEQR--GEPAVYLPL   81 (234)
T ss_pred             CCCCCCCCCHHCCCCC-CCHHHHHHHHHHHHCCCC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEH
T ss_conf             9999997773035718-759999999998760678----778838998899998899999999999807--996799789


Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC-CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHH
Q ss_conf             8889999999861988999999740310205444453175-069999999999885698799964875676136303457
Q gi|254780627|r  235 EYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK-LIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIR  313 (502)
Q Consensus       235 e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk-~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~  313 (502)
T Consensus        82 ~~~~~~~---------~~~~~~l~~~d~l~IDDi~~i~g~~~~e~~lF~l~N~~~~~~~~llits~~~P~~l~~~l~DL~  152 (234)
T PRK05642         82 AELLDRG---------PELLDNLEQYELVCIDDLDVIAGKADWEEALFHLFNRLRDSGRRLLLAASKSPRELPVKLPDLK  152 (234)
T ss_pred             HHHHHHH---------HHHHHHHHHCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHH
T ss_conf             9987544---------9998624227989893645546885999999999999998399599957879555230016799


Q ss_pred             HHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-HCCCCCHHH
Q ss_conf             6530211577515888999999999998864311689789899999985027888999999999999863-024687788
Q gi|254780627|r  314 SRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHS-FAPILTAEI  392 (502)
Q Consensus       314 SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~-~~~~~~~~~  392 (502)
T Consensus       153 SRl~~~~~~~i~~l~d~~~~~iL~~~-----a~~rgi~l~~~v~~yl~~r~~R~~~~L~~~l~~Ld~~sl~~kr~iTipl  227 (234)
T PRK05642        153 SRLTLALVFQMRGLSDEDKLRALQLR-----ASRRGLHLTDEVGHFILTRGTRSMSALFDLLERLDQASLQAQRKLTIPF  227 (234)
T ss_pred             HHHHCCCEEEECCCCHHHHHHHHHHH-----HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             99957812751489989999999999-----7754689998999999997358899999999999999998389999999


Q ss_pred             HHHHHH
Q ss_conf             999998
Q gi|254780627|r  393 ADELLS  398 (502)
Q Consensus       393 ~~~~l~  398 (502)
T Consensus       228 vk~vLg  233 (234)
T PRK05642        228 LKETLG  233 (234)
T ss_pred             HHHHHC
T ss_conf             999838