HHsearch alignment for GI: 254780627 and conserved domain: PRK05917

>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=94.64  E-value=0.43  Score=27.82  Aligned_cols=134  Identities=16%  Similarity=0.201  Sum_probs=73.1

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHH-------------CCCCCEEEEEHHHHHHHHHHHHHCCCHHH---HHHHH---
Q ss_conf             548986278888579999999999863-------------06881686469888999999986198899---99997---
Q gi|254780627|r  197 NPLFIHASVGLGKTHLLQAIANASIKR-------------QPNLRVVYLTAEYFMWRFASAIRDNCALN---LKDSL---  257 (502)
Q Consensus       197 NPLfi~G~~GlGKTHLl~ai~~~~~~~-------------~~~~~v~y~~~e~F~~~~~~a~~~~~~~~---fr~~~---  257 (502)
T Consensus        20 HAyLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~~~~i~~~~HPD~--~~i~pe~k-------~~~~~Id~iR~l~~~i~~~   90 (290)
T PRK05917         20 SAILLHGQDLSNLSQYAYELASLILLESSPEAQYKISQKIHPDI--HEFFPEGK-------GRLHSIETPRAIKKQIWIH   90 (290)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCE--EEECCCCC-------CCCCCHHHHHHHHHHHCCC
T ss_conf             06876899986599999999999857899616889874689985--99615777-------8878678999999996418


Q ss_pred             ---HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHH
Q ss_conf             ---40310205444453175069999999999885698799964875676136303457653021157751588899999
Q gi|254780627|r  258 ---RNIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFS  334 (502)
Q Consensus       258 ---r~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~  334 (502)
T Consensus        91 p~~g~~KV~IId~Ad~Mn-~~AaNALLKtLEEPP~~t-vfILit~~~----~~lLpTI~SRCQ~---I~i--~~~e----  155 (290)
T PRK05917         91 PYEANYKIYIIHEADRMT-LDAISAFLKVLEDPPKHS-VIILTSAKP----QRLPPTIRSRSLS---IHI--PGEE----  155 (290)
T ss_pred             CCCCCCEEEEECCHHHHC-HHHHHHHHHHHCCCCCCE-EEEEEECCH----HHCCHHHHHCCCE---EEC--CCCC----
T ss_conf             646882699975677638-999999999734798785-999986992----5482377633511---677--7620----


Q ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf             9999998864311689789899999985027888
Q gi|254780627|r  335 ILKNRLAISQKEDPKLNINEEVLMHVARTVTTSG  368 (502)
Q Consensus       335 Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~v  368 (502)
T Consensus       156 --------------~~~i~~e~~~~l~~~a~g~~  175 (290)
T PRK05917        156 --------------KTLPSKEDIAYLIRYAQGKE  175 (290)
T ss_pred             --------------CCCCCHHHHHHHHHHHCCCH
T ss_conf             --------------13478899999999846973