HHsearch alignment for GI: 254780627 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=99.60  E-value=2.6e-14  Score=121.68  Aligned_cols=132  Identities=20%  Similarity=0.307  Sum_probs=106.9

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC-C
Q ss_conf             548986278888579999999999863068816864698889999999861988999999740310205444453175-0
Q gi|254780627|r  197 NPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK-L  275 (502)
Q Consensus       197 NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk-~  275 (502)
T Consensus        99 ~Nvil~G~~GtGKThLA~Alg~~A~~~--G~~v~f~~~~~L~~~L~~a~~~g~~~~~~~~l~~~dLLIiDe~g~~~~~~~  176 (254)
T PRK06526         99 ENVVFLGPPGTGKTHLAIGLGIRACQA--GHRVLFATAAQWVARLAAAHHAGRLQDELVKLGRIPLLIVDEVGYIPFEAE  176 (254)
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCCHH
T ss_conf             878998999986899999999999986--996799877999999999885580999999851368776502136447889


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCHHHHCC------CCHHHHHHHH-CCEEEEECCCCHHH
Q ss_conf             69999999999885698799964875676136------3034576530-21157751588899
Q gi|254780627|r  276 IQHEFCHLLNSLLDSAKQVVAAADRPPSELES------LDPRIRSRLQ-GGVSVPLGLHDYEM  331 (502)
Q Consensus       276 tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~------l~~rL~SR~~-~Gl~~~i~~Pd~e~  331 (502)
T Consensus       177 ~a~~lf~li~~Rye~-~S~IiTSn~~~~~W~~~f~D~~la~AilDRL~H~a~~i~~~G~SyR~  238 (254)
T PRK06526        177 AANLFFQLVSSRYER-ASLIVTSNKPFGRWGEVFGDDVVAAAMIDRLVHHAEVISLKGDSYRL  238 (254)
T ss_pred             HHHHHHHHHHHHHCC-CCEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf             999999999999745-88676658986688886486899999999862562899843886653