HHsearch alignment for GI: 254780627 and conserved domain: PRK06871

>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=96.50  E-value=0.02  Score=37.22  Aligned_cols=132  Identities=17%  Similarity=0.155  Sum_probs=78.4

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC-------------------EEEEEHHHHHHHHHHHHHCCCHHHHHH--
Q ss_conf             54898627888857999999999986306881-------------------686469888999999986198899999--
Q gi|254780627|r  197 NPLFIHASVGLGKTHLLQAIANASIKRQPNLR-------------------VVYLTAEYFMWRFASAIRDNCALNLKD--  255 (502)
Q Consensus       197 NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~-------------------v~y~~~e~F~~~~~~a~~~~~~~~fr~--  255 (502)
T Consensus        24 HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~~~k~I~vd~IR~--l~~~~~~~  101 (324)
T PRK06871         24 HALLFKADSGLGTEQLIRALAQWLMCQAPGDEQPCGQCHSCHLFQAGNHPDFHILEPIDGKDIGVDQVRE--INEKVSQF  101 (324)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH--HHHHHHHC
T ss_conf             3787689999789999999999982899999998888989999973899987998467888788999999--99998646


Q ss_pred             -HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHH
Q ss_conf             -9740310205444453175069999999999885698799964875676136303457653021157751588899999
Q gi|254780627|r  256 -SLRNIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFS  334 (502)
Q Consensus       256 -~~r~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~  334 (502)
T Consensus       102 ~~~g~~KV~iI~~ae~m~-~~AaNALLKtLEEPp-~~~~fiL~t~~~~----~ll~TI~SRCq---~~~~~~p~~~~~~~  172 (324)
T PRK06871        102 AQQGGNKVVYIQGAERLT-EAAANALLKTLEEPR-PNTYFLLQADLSA----SLLATIYSRCQ---TWLIHVPEEQIALD  172 (324)
T ss_pred             CCCCCCEEEEECCHHHHH-HHHHHHHHHHHCCCC-CCEEEEEEECCCC----CCCCHHHHCCC---CEECCCCCHHHHHH
T ss_conf             220596699975888857-999999999833898-7838999878701----03240862661---20089949999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780627|r  335 ILKNR  339 (502)
Q Consensus       335 Il~~k  339 (502)
T Consensus       173 wL~~~  177 (324)
T PRK06871        173 WLQAQ  177 (324)
T ss_pred             HHHHH
T ss_conf             99974