HHsearch alignment for GI: 254780627 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=96.50 E-value=0.02 Score=37.22 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=78.4
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC-------------------EEEEEHHHHHHHHHHHHHCCCHHHHHH--
Q ss_conf 54898627888857999999999986306881-------------------686469888999999986198899999--
Q gi|254780627|r 197 NPLFIHASVGLGKTHLLQAIANASIKRQPNLR-------------------VVYLTAEYFMWRFASAIRDNCALNLKD-- 255 (502)
Q Consensus 197 NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~-------------------v~y~~~e~F~~~~~~a~~~~~~~~fr~-- 255 (502)
T Consensus 24 HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~~~k~I~vd~IR~--l~~~~~~~ 101 (324)
T PRK06871 24 HALLFKADSGLGTEQLIRALAQWLMCQAPGDEQPCGQCHSCHLFQAGNHPDFHILEPIDGKDIGVDQVRE--INEKVSQF 101 (324)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH--HHHHHHHC
T ss_conf 3787689999789999999999982899999998888989999973899987998467888788999999--99998646
Q ss_pred -HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHH
Q ss_conf -9740310205444453175069999999999885698799964875676136303457653021157751588899999
Q gi|254780627|r 256 -SLRNIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFS 334 (502)
Q Consensus 256 -~~r~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~ 334 (502)
T Consensus 102 ~~~g~~KV~iI~~ae~m~-~~AaNALLKtLEEPp-~~~~fiL~t~~~~----~ll~TI~SRCq---~~~~~~p~~~~~~~ 172 (324)
T PRK06871 102 AQQGGNKVVYIQGAERLT-EAAANALLKTLEEPR-PNTYFLLQADLSA----SLLATIYSRCQ---TWLIHVPEEQIALD 172 (324)
T ss_pred CCCCCCEEEEECCHHHHH-HHHHHHHHHHHCCCC-CCEEEEEEECCCC----CCCCHHHHCCC---CEECCCCCHHHHHH
T ss_conf 220596699975888857-999999999833898-7838999878701----03240862661---20089949999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780627|r 335 ILKNR 339 (502)
Q Consensus 335 Il~~k 339 (502)
T Consensus 173 wL~~~ 177 (324)
T PRK06871 173 WLQAQ 177 (324)
T ss_pred HHHHH
T ss_conf 99974