HHsearch alignment for GI: 254780627 and conserved domain: PRK07399
>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=97.34 E-value=0.015 Score=38.14 Aligned_cols=181 Identities=16% Similarity=0.214 Sum_probs=103.6
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH---------------CCCCC
Q ss_conf 876328861478999999998241001365555548986278888579999999999863---------------06881
Q gi|254780627|r 164 FSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKR---------------QPNLR 228 (502)
Q Consensus 164 FDnFVVG~sN~lA~aAAkaVAe~pg~~~~~~~~NPLfi~G~~GlGKTHLl~ai~~~~~~~---------------~~~~~ 228 (502)
T Consensus 3 F~~-iiGq~~~~~~L--~~ai~~-~rl~-----hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri~~~nHPDl- 72 (314)
T PRK07399 3 FAN-LIGQPLAIELL--TAAIEQ-NRIA-----PAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRLEEGNHPDL- 72 (314)
T ss_pred CCC-CCCCHHHHHHH--HHHHHC-CCCC-----CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCE-
T ss_conf 331-25949999999--999985-9967-----4487789998329999999999985789999766558751899977-
Q ss_pred EEEEE-----------HHHHHHHHHHHHHCC-----CHHHHH---HHHH------HCCHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 68646-----------988899999998619-----889999---9974------0310205444453175069999999
Q gi|254780627|r 229 VVYLT-----------AEYFMWRFASAIRDN-----CALNLK---DSLR------NIDLLLIDDMQFLQGKLIQHEFCHL 283 (502)
Q Consensus 229 v~y~~-----------~e~F~~~~~~a~~~~-----~~~~fr---~~~r------~~DvLliDDiqfl~gk~tqee~f~~ 283 (502)
T Consensus 73 -~~i~P~~~~~g~~~~~~~~~~~---~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m-~~~AaNaLLKt 147 (314)
T PRK07399 73 -LWVEPTYQHQGKLITASEAEEA---GLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETM-NEAAANALLKT 147 (314)
T ss_pred -EEEECCCCCCCCCCCHHHHHHH---HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHC-CHHHHHHHHHH
T ss_conf -8860562003454557789876---530268777879999999999731885688479998897871-99999999986
Q ss_pred HHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 99988569879996487567613630345765302115775158889999999999988643116897898999999850
Q gi|254780627|r 284 LNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVART 363 (502)
Q Consensus 284 ~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~ 363 (502)
T Consensus 148 LEE-P~~~-~fILit~~-~~---~lLpTI~SRCQ---~i~F~~l~~~~i~~~L~~~-----~~~~~~~~~~~~l~~~A~- 212 (314)
T PRK07399 148 LEE-PGNG-TLILIAPS-PE---SLLPTIVSRCQ---IIPFYRLSDEQLEQVLKRL-----GDNINEILDHPELLALAQ- 212 (314)
T ss_pred HCC-CCCC-EEEEEECC-HH---HCCHHHHCCCE---EEECCCCCHHHHHHHHHHC-----CCCCCCCCCHHHHHHHHC-
T ss_conf 147-8785-69999799-36---49146641875---6338998999999999971-----664331027899998817-
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 2788899999999
Q gi|254780627|r 364 VTTSGRELDGAFN 376 (502)
Q Consensus 364 ~~~~vR~Legal~ 376 (502)
T Consensus 213 --GspG~a~~~~~ 223 (314)
T PRK07399 213 --GSPGAAIANIE 223 (314)
T ss_pred --CCHHHHHHHHH
T ss_conf --99799999999