HHsearch alignment for GI: 254780627 and conserved domain: PRK07452
>PRK07452 DNA polymerase III subunit delta; Validated.
Probab=97.94 E-value=0.002 Score=44.42 Aligned_cols=181 Identities=13% Similarity=0.139 Sum_probs=111.7
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHH-CCCCCEEEEEHHHH--HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCC-
Q ss_conf 986278888579999999999863-06881686469888--99999998619889999997403102054444531750-
Q gi|254780627|r 200 FIHASVGLGKTHLLQAIANASIKR-QPNLRVVYLTAEYF--MWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGKL- 275 (502)
Q Consensus 200 fi~G~~GlGKTHLl~ai~~~~~~~-~~~~~v~y~~~e~F--~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk~- 275 (502)
T Consensus 5 ll~GeE~~li~~~~~~i~~~~~~~~~~~fn~~~~dg~e~~~~~~~l~~a--~T~P-f---~~~~RlVvvk~a~~~~~~~~ 78 (326)
T PRK07452 5 LYWGEDDFALNQAIEKLIDQVVDPEWKSFNYSRLDGDDAEQAIQALNEA--MTPP-F---GSGGRLVWLKNSPLCQGCSE 78 (326)
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH--CCCC-C---CCCCEEEEEECCCCCCCCCH
T ss_conf 9983828999999999999608954467623787375542599999986--2788-7---78855999836610024878
Q ss_pred -HHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHH--H-HCCEEEEECCC---CHHHHHHHHHHHHHHHHHHCC
Q ss_conf -6999999999988569879996487567613630345765--3-02115775158---889999999999988643116
Q gi|254780627|r 276 -IQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSR--L-QGGVSVPLGLH---DYEMRFSILKNRLAISQKEDP 348 (502)
Q Consensus 276 -tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR--~-~~Gl~~~i~~P---d~e~r~~Il~~k~~~~~~~~~ 348 (502)
T Consensus 79 ~~~~~l~~~l~~~p-~~t~lv~~~~~k------~D~R~K~~K~l~k~~~~~ef~~~~~~~~~~l~~wi~~~-----~~~~ 146 (326)
T PRK07452 79 ELLAELERTLPLIP-ENTHLLLTNTKK------PDGRLKSTKLLQKLAEEKEFSLPPPWDGEGQKQLVERT-----AQEL 146 (326)
T ss_pred HHHHHHHHHHHCCC-CCEEEEEEECCC------CCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHH-----HHHC
T ss_conf 89999999861799-975999984676------32377878999840113454068865799999999999-----9986
Q ss_pred CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHH
Q ss_conf 8978989999998502788899999999999986302-4687788999998
Q gi|254780627|r 349 KLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHSFA-PILTAEIADELLS 398 (502)
Q Consensus 349 ~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~~~-~~~~~~~~~~~l~ 398 (502)
T Consensus 147 g~~i~~~a~~~Lv~~~G~dl~~l~~EleKL~ly~~~~~~~It~e~V~~lv~ 197 (326)
T PRK07452 147 GVKLTPEAAELLAEAVGNDSRRLYNELEKLALYAENSEKPISAEDVKALVS 197 (326)
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
T ss_conf 999899999999998684399999999999986289997068999998827