HHsearch alignment for GI: 254780627 and conserved domain: PRK07940

>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=95.87  E-value=0.075  Score=33.18  Aligned_cols=146  Identities=18%  Similarity=0.160  Sum_probs=86.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCC------------------CCEEEEEHHHHHHHHHHHHHCCCHHHHHHH---
Q ss_conf             48986278888579999999999863068------------------816864698889999999861988999999---
Q gi|254780627|r  198 PLFIHASVGLGKTHLLQAIANASIKRQPN------------------LRVVYLTAEYFMWRFASAIRDNCALNLKDS---  256 (502)
Q Consensus       198 PLfi~G~~GlGKTHLl~ai~~~~~~~~~~------------------~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~---  256 (502)
T Consensus        41 AyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~i~~g~hpDv~~i~p~~~------~i~id~iR~l~~~~~~  114 (395)
T PRK07940         41 AWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRTVLAGTHPDVRVVVPEGL------SIGVDEVREIVQIAAR  114 (395)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCC------CCCHHHHHHHHHHHHH
T ss_conf             3763689987889999999999669999999998787899987689987189826877------6889999999999852


Q ss_pred             --HH-HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHHHH
Q ss_conf             --74-031020544445317506999999999988569879996487567613630345765302115775158889999
Q gi|254780627|r  257 --LR-NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEMRF  333 (502)
Q Consensus       257 --~r-~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~r~  333 (502)
T Consensus       115 ~p~~~~~kv~ii~~a~~m~-~~a~NalLKtLEEPp~~-~~fiL~t~~-~~---~llpTI~SRc---q~~~f~~~~~~~i~  185 (395)
T PRK07940        115 RPTTGRWRIVVIEDADRLT-ERAANALLKAVEEPPPR-TVWLLCAPS-VE---DVLPTIRSRC---RHVALRTPSVEAVA  185 (395)
T ss_pred             CCCCCCCEEEEEECHHHHC-HHHHHHHHHHHCCCCCC-EEEEEEECC-HH---HHHHHHHHHH---EECCCCCCCHHHHH
T ss_conf             7303795599980778748-99999999852178888-699987399-78---7446887440---00237999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf             99999998864311689789899999985027888
Q gi|254780627|r  334 SILKNRLAISQKEDPKLNINEEVLMHVARTVTTSG  368 (502)
Q Consensus       334 ~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~v  368 (502)
T Consensus       186 ~~L~~~----------~gi~~~~A~~aA~~s~G~i  210 (395)
T PRK07940        186 DVLVRR----------DGVDPETAQWAARASGGHI  210 (395)
T ss_pred             HHHHHC----------CCCCHHHHHHHHHHHCCCH
T ss_conf             999870----------1999899999999808988