HHsearch alignment for GI: 254780627 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=96.87 E-value=0.014 Score=38.30 Aligned_cols=151 Identities=15% Similarity=0.213 Sum_probs=87.6
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH-----H--HHHHHHC---------CCHHHHHH---H-
Q ss_conf 5489862788885799999999998630688168646988899-----9--9999861---------98899999---9-
Q gi|254780627|r 197 NPLFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMW-----R--FASAIRD---------NCALNLKD---S- 256 (502)
Q Consensus 197 NPLfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~-----~--~~~a~~~---------~~~~~fr~---~- 256 (502)
T Consensus 27 HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~-~~~~~i~~g~HPD~~~i~~~~~~~~~k~k~~I~IdqiR~l~~~~ 105 (319)
T PRK08769 27 HGLLICGPEGLGKRAVALALAEHVLASGPDPALAQ-RTRQLIAAGTHPDLQLVSFIPNRTGDKLRTEIVIEQVREISQKL 105 (319)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 06875899987899999999999837997976543-38899966899896877534444543112348699999999996
Q ss_pred ----HH-HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEEEECCCCHHH
Q ss_conf ----74-0310205444453175069999999999885698799964875676136303457653021157751588899
Q gi|254780627|r 257 ----LR-NIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPLGLHDYEM 331 (502)
Q Consensus 257 ----~r-~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~~i~~Pd~e~ 331 (502)
T Consensus 106 ~~~p~~g~~KV~IId~Ad~mn-~~AaNalLK~LEEP-p~~~~~iL~~~~~~----~ll~TI~SRCq---~~~~~~p~~~~ 176 (319)
T PRK08769 106 ALTPQYGIAQVVIVDPADAIN-RSACNALLKTLEEP-SPGRYLWLISAQPA----RLPATIRSRCQ---RLEFKLPPAHE 176 (319)
T ss_pred HHCCCCCCCEEEEECCHHHCC-HHHHHHHHHHHCCC-CCCEEEEEEECCHH----HCCHHHHHCCE---EECCCCCCHHH
T ss_conf 137202795699980667528-99999999982279-98848999869936----58247764850---11189969999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf 9999999998864311689789899999985027888
Q gi|254780627|r 332 RFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSG 368 (502)
Q Consensus 332 r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~v 368 (502)
T Consensus 177 ~~~~L~~~---------g--~~~~~a~~~l~~a~g~p 202 (319)
T PRK08769 177 ALAWLLSQ---------G--VSERAAQEALDAARGHP 202 (319)
T ss_pred HHHHHHHC---------C--CCHHHHHHHHHHHCCCH
T ss_conf 99999975---------9--99189999999827996