HHsearch alignment for GI: 254780627 and conserved domain: PRK12678

>PRK12678 transcription termination factor Rho; Provisional.
Probab=92.64  E-value=0.18  Score=30.48  Aligned_cols=35  Identities=31%  Similarity=0.381  Sum_probs=31.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             89862788885799999999998630688168646
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLT  233 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~  233 (502)
T Consensus       414 gLIVapPkaGKT~ll~~ia~ai~~N~pe~~l~vlL  448 (667)
T PRK12678        414 GLIVSPPKAGKTTILQDIANAITTNNPECHLMVVL  448 (667)
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             46757997872599999999998569972899997