HHsearch alignment for GI: 254780627 and conserved domain: PRK13642
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=94.08 E-value=0.53 Score=27.15 Aligned_cols=206 Identities=16% Similarity=0.175 Sum_probs=84.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHH----HHHC-----CHHHHHHHH
Q ss_conf 8986278888579999999999863068816864698889999999861988999999----7403-----102054444
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWRFASAIRDNCALNLKDS----LRNI-----DLLLIDDMQ 269 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~----~r~~-----DvLliDDiq 269 (502)
T Consensus 36 ~aiiG~sGsGKSTL~~~l~Gl~~~~--~G~-I~~~G~~i~--------~~~~~~~r~~ig~VfQ~p~~~l~~~tV~e~i~ 104 (277)
T PRK13642 36 VSIIGQNGSGKSTTARLIDGLFEEF--EGI-VKIDGERLT--------AENVWNLRRKIGMVFQNPDNQFVGATVEDDVA 104 (277)
T ss_pred EEEECCCCCHHHHHHHHHHCCCCCC--CCE-EEECCEECC--------CCCHHHHHCCCEEEEECCCCCCCCCCHHHHHH
T ss_conf 9999999968999999996389988--848-999999998--------57888885176899989763257550888898
Q ss_pred HH-CCCC-HHHHHHHHHHH-HHHCCCEEEEECCCCHHHHCCCCHHHHHHHHCCEEE-----EECCC----CHHHHHHHHH
Q ss_conf 53-1750-69999999999-885698799964875676136303457653021157-----75158----8899999999
Q gi|254780627|r 270 FL-QGKL-IQHEFCHLLNS-LLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSV-----PLGLH----DYEMRFSILK 337 (502)
Q Consensus 270 fl-~gk~-tqee~f~~~n~-l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~~Gl~~-----~i~~P----d~e~r~~Il~ 337 (502)
T Consensus 105 ~g~~~~~~~~~e~~~~v~~~l~~~~l--~~~~~~~P~~LSGGqrQRv-aIA~aLa~~P~ililDEPTs~LD~~~~~~i~~ 181 (277)
T PRK13642 105 FGMENQGIPREEMIKRVDEALLAVNM--LDFKTREPARLSGGQKQRV-AVAGIIALRPEIIILDESTSMLDPTGRSEIMR 181 (277)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCC--HHHHHCCHHHCCHHHHHHH-HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 77766699999999999999987799--6565579122899999999-99999966999999958876589899999999
Q ss_pred HHHHHHHHHCCCC---CCCHHH--HHHHHHHCC----------CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 9998864311689---789899--999985027----------8889999999999998630246877889999987630
Q gi|254780627|r 338 NRLAISQKEDPKL---NINEEV--LMHVARTVT----------TSGRELDGAFNQLVFRHSFAPILTAEIADELLSHLVN 402 (502)
Q Consensus 338 ~k~~~~~~~~~~~---~l~~~v--~~~la~~~~----------~~vR~Legal~~l~~~~~~~~~~~~~~~~~~l~~~~~ 402 (502)
T Consensus 182 ll~~--L~~~~~~Tii~iTHdl~~~~~-aDrv~vm~~G~Iv~~G~~~evf~~p~~l-~~~~l~~P~~~~l~~~L~~~g~~ 257 (277)
T PRK13642 182 VIHE--IKDKYHLTVLSITHDLDEAAS-SDRILVMRAGEIIKEAAPSELFATSEDM-VEIGLDVPFSSNLMKDLRTNGFD 257 (277)
T ss_pred HHHH--HHHHCCCEEEEEEECHHHHHH-CCEEEEEECCEEEEECCHHHHHCCHHHH-HHCCCCCCHHHHHHHHHHHCCCC
T ss_conf 9999--998169899999458899971-9989999899999976899987696779-87799998799999999975998
Q ss_pred CCCCCCCCHHHHHHHHHHHHC
Q ss_conf 378875798999999999809
Q gi|254780627|r 403 TGETKKMRIEDIQRMVAKHYN 423 (502)
Q Consensus 403 ~~~~~~i~~~~I~~~V~~~~~ 423 (502)
T Consensus 258 -~~~~~~t~~e~~~~l~~~lg 277 (277)
T PRK13642 258 -LPEKYLSEDELVELLADKLG 277 (277)
T ss_pred -CCCCCCCHHHHHHHHHHHCC
T ss_conf -99887599999999998609