HHsearch alignment for GI: 254780627 and conserved domain: PRK13873
>PRK13873 conjugal transfer ATPase TrbE; Provisional.
Probab=92.36 E-value=0.29 Score=29.05 Aligned_cols=67 Identities=9% Similarity=0.121 Sum_probs=41.5
Q ss_pred HHHHHHHHHHCCCHHHHH--C---CCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 999999998099999940--8---8877401445799999999851568789998847984379999999999998616
Q gi|254780627|r 413 DIQRMVAKHYNISRNDLL--S---NRRVRTVVRPRQVAMYLSKIMTPRSFPEIGRRFGDRDHTTVLHAVRKVEKMLETD 486 (502)
Q Consensus 413 ~I~~~V~~~~~i~~~~l~--s---~~R~~~i~~~RqiamyL~r~~t~~s~~~IG~~fg~rdHsTV~~a~~ki~~~~~~d 486 (502)
T Consensus 712 ~~~~~Y-~~fGLn~rqieiIa~a~pKRdYy~~s~~------g~Rlf~L~L~~~~la~~~~s~~~d~~~~~~l~~~~g~~ 783 (815)
T PRK13873 712 QIAAIY-RRFGLNDRQIEILARATPKRDYYCQSRR------GNRLFELGLGPVALAFCAASSKADQALIDRVLAEHGRD 783 (815)
T ss_pred HHHHHH-HHCCCCHHHHHHHHHCCCCCEEEEECCC------CCEEEECCCCHHHHHEEECCCHHHHHHHHHHHHHHCCC
T ss_conf 068999-8749999999999733746635898799------87789738970421000038888999999999981910