HHsearch alignment for GI: 254780627 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=97.92 E-value=0.00015 Score=52.31 Aligned_cols=171 Identities=19% Similarity=0.241 Sum_probs=109.2
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHC-----CCCCEEEEEH------HHHHHHHHHHHHCCCH-------HHHHHHH-
Q ss_conf 5489862788885799999999998630-----6881686469------8889999999861988-------9999997-
Q gi|254780627|r 197 NPLFIHASVGLGKTHLLQAIANASIKRQ-----PNLRVVYLTA------EYFMWRFASAIRDNCA-------LNLKDSL- 257 (502)
Q Consensus 197 NPLfi~G~~GlGKTHLl~ai~~~~~~~~-----~~~~v~y~~~------e~F~~~~~~a~~~~~~-------~~fr~~~- 257 (502)
T Consensus 294 ~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F~fVEINGMkLt~P~qaY~~L~e~Ltg~k~~~~~~A~~lL~k~F~ 373 (650)
T PTZ00112 294 QILYISGVPGTGKTATVYMVIKELQNKKLKGQLPWFNLFEINGVNLVHPNAAYRVFYKKLFNKKPPNALNSYKELDKLFN 373 (650)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 56999789999800369999999999997089998159997363779878899999999848988867899999999826
Q ss_pred --HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHC-CCCHHHHHHHHCCEEEEECCCCHHHHHH
Q ss_conf --4031020544445317506999999999988569879996487567613-6303457653021157751588899999
Q gi|254780627|r 258 --RNIDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELE-SLDPRIRSRLQGGVSVPLGLHDYEMRFS 334 (502)
Q Consensus 258 --r~~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~-~l~~rL~SR~~~Gl~~~i~~Pd~e~r~~ 334 (502)
T Consensus 374 ~~r~p~VlLvDELD~Lv-TkkQ~VlYNLFdWPT~~~SkLIVIaIANTMDLPERL~~RVsSRLGltR-ltF~PYt~~QL~e 451 (650)
T PTZ00112 374 NNRTPSILIVDEADYIV-TKTQKVLFTLFDWPTKKNSKLILIIISNTMDLPYKMKPSCRSRLAFGR-LVFSPYKYQQIEK 451 (650)
T ss_pred CCCCCEEEEECHHHHHH-HCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCE-ECCCCCCHHHHHH
T ss_conf 89971899971577776-367745777366889888707999985067860656666555228850-0439989999999
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC---CCHHHHHHHH
Q ss_conf 9999998864311689789899999985027---8889999999
Q gi|254780627|r 335 ILKNRLAISQKEDPKLNINEEVLMHVARTVT---TSGRELDGAF 375 (502)
Q Consensus 335 Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~---~~vR~Legal 375 (502)
T Consensus 452 II~sRL~~~------~~f~~dAIQl~ARKVAavSGDARRALdIC 489 (650)
T PTZ00112 452 VIKERLENC------EIIDHTALQLCARRVTNYSGDMRKALQIC 489 (650)
T ss_pred HHHHHHCCC------CCCCHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 999986267------77887899999888875031489999999