HHsearch alignment for GI: 254780627 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=92.15 E-value=0.12 Score=31.62 Aligned_cols=33 Identities=33% Similarity=0.488 Sum_probs=23.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEH
Q ss_conf 898627888857999999999986306881686469
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTA 234 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~ 234 (502)
T Consensus 27 ~~i~GpSGsGKSTLL~~i~gl---~~p~sG~i~~~g 59 (206)
T TIGR03608 27 VAIVGESGSGKSTLLNIIGLL---EKPDSGQVYLNG 59 (206)
T ss_pred EEEECCCCCCHHHHHHHHHCC---CCCCCEEEEECC
T ss_conf 999879997099999999759---998975999999