HHsearch alignment for GI: 254780627 and conserved domain: cd03216
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=95.28 E-value=0.022 Score=36.93 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=67.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH-HHHHHHCC---------C----HHHHHHHHHHCCHHH
Q ss_conf 898627888857999999999986306881686469888999-99998619---------8----899999974031020
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMWR-FASAIRDN---------C----ALNLKDSLRNIDLLL 264 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~~-~~~a~~~~---------~----~~~fr~~~r~~DvLl 264 (502)
T Consensus 29 ~~lvG~nGaGKSTl~~~i~Gl~~---p~~G~i~i~G~~i~~~~~~~~~~~gi~~v~qLSgG~~Qrv~iaral~~~p~lli 105 (163)
T cd03216 29 HALLGENGAGKSTLMKILSGLYK---PDSGEILVDGKEVSFASPRDARRAGIAMVYQLSVGERQMVEIARALARNARLLI 105 (163)
T ss_pred EEEECCCCCCHHHHHHHHHCCCC---CCCCEEEECCEECCCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf 99998899899999999957768---985789999999999999999987994894699899999999999972999999
Q ss_pred HHHHHHHCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHH
Q ss_conf 5444453175--06999999999988569879996487567613630345
Q gi|254780627|r 265 IDDMQFLQGK--LIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRI 312 (502)
Q Consensus 265 iDDiqfl~gk--~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL 312 (502)
T Consensus 106 lDEP--t~gLD~~~~~~i~~~l~~l~~~G~til~vtH~-l~~~~~~~Drv 152 (163)
T cd03216 106 LDEP--TAALTPAEVERLFKVIRRLRAQGVAVIFISHR-LDEVFEIADRV 152 (163)
T ss_pred EECC--CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHCCEE
T ss_conf 9097--55799999999999999998789899999384-99999869999