HHsearch alignment for GI: 254780627 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=95.66 E-value=0.01 Score=39.28 Aligned_cols=25 Identities=36% Similarity=0.392 Sum_probs=20.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8986278888579999999999863
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKR 223 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~ 223 (502)
T Consensus 29 ~~l~G~NGsGKSTLlk~i~Gl~~p~ 53 (201)
T cd03231 29 LQVTGPNGSGKTTLLRILAGLSPPL 53 (201)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 9999999999999999996677888