>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=92.92  E-value=0.24  Score=29.60  Aligned_cols=23  Identities=26%  Similarity=0.391  Sum_probs=18.3

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             89862788885799999999998
Q gi|254780627|r  199 LFIHASVGLGKTHLLQAIANASI  221 (502)
Q Consensus       199 Lfi~G~~GlGKTHLl~ai~~~~~  221 (502)
T Consensus        28 v~liGpNGaGKSTLlk~l~Gll~   50 (246)
T cd03237          28 IGILGPNGIGKTTFIKMLAGVLK   50 (246)
T ss_pred             EEEECCCCCHHHHHHHHHHCCCC
T ss_conf             99997999769999999977878