HHsearch alignment for GI: 254780627 and conserved domain: pfam00265
>pfam00265 TK Thymidine kinase.
Probab=95.75 E-value=0.021 Score=37.11 Aligned_cols=91 Identities=18% Similarity=0.180 Sum_probs=54.8
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH---H-HH-------HHH--HCCCHHHHHH-HHHHCCHHHH
Q ss_conf 9862788885799999999998630688168646988899---9-99-------998--6198899999-9740310205
Q gi|254780627|r 200 FIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFMW---R-FA-------SAI--RDNCALNLKD-SLRNIDLLLI 265 (502)
Q Consensus 200 fi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~~---~-~~-------~a~--~~~~~~~fr~-~~r~~DvLli 265 (502)
T Consensus 5 ~i~GpMfsGKTteLi~~~~~~~~~--gkkvl~i~p~~D~R~~~~~i~Sh~g~~~~~~~~~~~~~~~~~~~~~~~~dvI~I 82 (175)
T pfam00265 5 LIIGPMFSGKSTELIRRVYRYQLA--QYKCVVIKYAIDNRYGTGKVVTHDGISMEAKLIKTSLLDDIKDIISNTIHVVGI 82 (175)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHC--CCEEEEEEECCCCCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHCCCCCEEEE
T ss_conf 999251778999999999999987--993999946112778999698899981145673653199999864368789998
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 444453175069999999999885698799964
Q gi|254780627|r 266 DDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAA 298 (502)
Q Consensus 266 DDiqfl~gk~tqee~f~~~n~l~~~gkqiv~ts 298 (502)
T Consensus 83 DEaQFf~------~l~~~~~~~~~~~~~Viv~G 109 (175)
T pfam00265 83 DEAQFFD------DIVEFCETMANLGKIVIVAG 109 (175)
T ss_pred EHHHHHH------HHHHHHHHHHHCCCEEEEEE
T ss_conf 3377526------48999999996799499987