HHsearch alignment for GI: 254780627 and conserved domain: pfam00270
>pfam00270 DEAD DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Probab=96.25 E-value=0.062 Score=33.78 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=20.9
Q ss_pred EEEECCCCCCHHHHHH-HHHHHHHHHCCCCCEEEEEHH
Q ss_conf 8986278888579999-999999863068816864698
Q gi|254780627|r 199 LFIHASVGLGKTHLLQ-AIANASIKRQPNLRVVYLTAE 235 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~-ai~~~~~~~~~~~~v~y~~~e 235 (502)
T Consensus 17 ~iv~~pTGsGKT~~~~~~~l~~~~~~~~~~~~v~l~Pt 54 (167)
T pfam00270 17 VLVQAPTGSGKTLAFLLPALQALLKNPDGPQALVLAPT 54 (167)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCH
T ss_conf 89988999758999999999998747789879999060