HHsearch alignment for GI: 254780627 and conserved domain: pfam00931

Probab=97.08  E-value=0.035  Score=35.57  Aligned_cols=179  Identities=16%  Similarity=0.093  Sum_probs=90.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHH--HHHCCCCCEEEEE----HHHHHHHHHHHHHCC-------CHH----HHHHHHHH-
Q ss_conf             48986278888579999999999--8630688168646----988899999998619-------889----99999740-
Q gi|254780627|r  198 PLFIHASVGLGKTHLLQAIANAS--IKRQPNLRVVYLT----AEYFMWRFASAIRDN-------CAL----NLKDSLRN-  259 (502)
Q Consensus       198 PLfi~G~~GlGKTHLl~ai~~~~--~~~~~~~~v~y~~----~e~F~~~~~~a~~~~-------~~~----~fr~~~r~-  259 (502)
T Consensus        21 vI~I~G~gGiGKTtLA~~v~~~~~i~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~l~~~l~~~L~~k  100 (285)
T pfam00931        21 VVGIVGMGGVGKTTLAKQIYNDDSVGGHFDSVAWVVVSKTYTEFRLQKDILQELGLDDSDWVEKNESELAVKIKEALLRK  100 (285)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             99988999563999999997165565059838999979766689999999998566654555578999999999997279


Q ss_pred             CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHH-CCEEEEECCCCHHHHHHHHHH
Q ss_conf             3102054444531750699999999998856987999648756761363034576530-211577515888999999999
Q gi|254780627|r  260 IDLLLIDDMQFLQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQ-GGVSVPLGLHDYEMRFSILKN  338 (502)
Q Consensus       260 ~DvLliDDiqfl~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l~~l~~rL~SR~~-~Gl~~~i~~Pd~e~r~~Il~~  338 (502)
T Consensus       101 r~LiVLDDVw~~---~~~~~l~~~~~~-~~~gSrIIvTTR~~~---------V~~~~~~~~~~~~l~~L~~~es~~Lf~~  167 (285)
T pfam00931       101 RFLLVLDDVWEK---NDWDKIGVPFPD-GENGSRVIVTTRSES---------VAGRMGGTSKPHEVESLEPEESWELFSN  167 (285)
T ss_pred             CEEEEECCCCCH---HHHHHHHCCCCC-CCCCCEEEEECCCHH---------HHHHCCCCCCEEECCCCCHHHHHHHHHH
T ss_conf             669996388878---999997345757-899827998557589---------9987378883476168987999999999


Q ss_pred             HHHHHHHHCCCCCCC---HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             998864311689789---89999998502788899999999999986302468778899999876
Q gi|254780627|r  339 RLAISQKEDPKLNIN---EEVLMHVARTVTTSGRELDGAFNQLVFRHSFAPILTAEIADELLSHL  400 (502)
Q Consensus       339 k~~~~~~~~~~~~l~---~~v~~~la~~~~~~vR~Legal~~l~~~~~~~~~~~~~~~~~~l~~~  400 (502)
T Consensus       168 ~a~~~-----~~~~~~~l~~~~~~Iv~~C~GlP----Lai~~lg~~--L~~k~~~~~W~~~l~~l  221 (285)
T pfam00931       168 KVFEK-----ELPPCPELEEVAKEIVEKCKGLP----LALKVLGGL--LAFKSTVQEWEHVLEQL  221 (285)
T ss_pred             HHCCC-----CCCCCHHHHHHHHHHHHHHCCCH----HHHHHHHHH--HCCCCCHHHHHHHHHHH
T ss_conf             84689-----89997679999999999858994----999999999--71799899999999975