HHsearch alignment for GI: 254780627 and conserved domain: pfam03215

>pfam03215 Rad17 Rad17 cell cycle checkpoint protein.
Probab=96.81  E-value=0.049  Score=34.50  Aligned_cols=176  Identities=11%  Similarity=0.057  Sum_probs=90.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHH-----HCCCCCEEEEEHHHHHHHHHHHH------HCCCHHHHHHH------HH--
Q ss_conf             4898627888857999999999986-----30688168646988899999998------61988999999------74--
Q gi|254780627|r  198 PLFIHASVGLGKTHLLQAIANASIK-----RQPNLRVVYLTAEYFMWRFASAI------RDNCALNLKDS------LR--  258 (502)
Q Consensus       198 PLfi~G~~GlGKTHLl~ai~~~~~~-----~~~~~~v~y~~~e~F~~~~~~a~------~~~~~~~fr~~------~r--  258 (502)
T Consensus        47 iLlLtGPaG~GKTTTI~lLAkeLG~ei~EW~NP~~----~~~~~~~~q~~d~~g~~~~~~~S~~~~F~eFLlr~~ky~sL  122 (490)
T pfam03215        47 ILLLTGPSGCGKSTTVKVLSKELGIEIIEWSNPEY----LHNPDNECQKPDFRGDCIVNSLSQMEQFREFLLRGARYGSL  122 (490)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCC----CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf             89987989988999999999975968998148654----56775022101212345766663777767887622335654


Q ss_pred             -----HCCHHHHHHHHHHCCCCHHHHHHHHHHHH-HHCCC-E-EEEECCC-CH-HHH----CCC-CHHH----HHHHHCC
Q ss_conf             -----03102054444531750699999999998-85698-7-9996487-56-761----363-0345----7653021
Q gi|254780627|r  259 -----NIDLLLIDDMQFLQGKLIQHEFCHLLNSL-LDSAK-Q-VVAAADR-PP-SEL----ESL-DPRI----RSRLQGG  319 (502)
Q Consensus       259 -----~~DvLliDDiqfl~gk~tqee~f~~~n~l-~~~gk-q-iv~tsd~-~P-~~l----~~l-~~rL----~SR~~~G  319 (502)
T Consensus       123 ~~~~~~kriILIEE~Pn~~~~-d~~~fr~~L~~~L~s~~~~PlV~IiSEt~s~~g~~~~~~~~~ta~rLlg~eIl~hp~i  201 (490)
T pfam03215       123 QGGGLKKKLILVEELPNQFYS-DAEKFREVIREVLQSIWHLPLIFCLTECNSLEGDNNQDRFGIDAETIMTKDILIMPRI  201 (490)
T ss_pred             CCCCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHCCCC
T ss_conf             457887359999658874423-6699999999999708999879999704666677643323210786359888708896


Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             1577515888999999999998864311689789899999985027888999999999999863
Q gi|254780627|r  320 VSVPLGLHDYEMRFSILKNRLAISQKEDPKLNINEEVLMHVARTVTTSGRELDGAFNQLVFRHS  383 (502)
Q Consensus       320 l~~~i~~Pd~e~r~~Il~~k~~~~~~~~~~~~l~~~v~~~la~~~~~~vR~Legal~~l~~~~~  383 (502)
T Consensus       202 ~~I~FNpIApT~M~KaL~~I~~kE-~-~~~~~~~~~~le~Ia~~S~GDIRs---AInsLQF~~~  260 (490)
T pfam03215       202 DTITFNPIAPTFMKKALVRISVQE-G-KLKSPKSDSKLEVICQEAGGDLRS---AINSLQFSSS  260 (490)
T ss_pred             CEEEECCCCHHHHHHHHHHHHHHH-C-CCCCCCCHHHHHHHHHHCCCCHHH---HHHHHHHHCC
T ss_conf             369868887889999999999985-7-655675203899999864872999---9999998626