HHsearch alignment for GI: 254780627 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=94.29 E-value=0.13 Score=31.43 Aligned_cols=85 Identities=18% Similarity=0.190 Sum_probs=63.1
Q ss_pred CCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCC-C-HHHHHHHHHHHHHHCCCEEEEECCCCHHH
Q ss_conf 816864698889999999861988999999740310205444453175-0-69999999999885698799964875676
Q gi|254780627|r 227 LRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQGK-L-IQHEFCHLLNSLLDSAKQVVAAADRPPSE 304 (502)
Q Consensus 227 ~~v~y~~~e~F~~~~~~a~~~~~~~~fr~~~r~~DvLliDDiqfl~gk-~-tqee~f~~~n~l~~~gkqiv~tsd~~P~~ 304 (502)
T Consensus 258 ~~v~~f~F~~LC~~------p~~~~DYl~ia~~f~~v~i~~VP~l~~~~~d~arRFI~LID~lYd~~~kL~~sa~~~~~~ 331 (361)
T pfam03969 258 GDLVWFSFADLCLA------PRHPSDYLALAERFSTVFLTDVPPMTRCSQDEARRFIALVDELYDRHVKLVASAEAALDD 331 (361)
T ss_pred CCEECCCHHHHHHC------CCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHH
T ss_conf 88500128888665------588899999998699999889988999870899999999999840799789987899999
Q ss_pred HCC---C---CHHHHHHHH
Q ss_conf 136---3---034576530
Q gi|254780627|r 305 LES---L---DPRIRSRLQ 317 (502)
Q Consensus 305 l~~---l---~~rL~SR~~ 317 (502)
T Consensus 332 Ly~g~~~~f~f~Rt~SRL~ 350 (361)
T pfam03969 332 LYRGGRLAFEFQRTLSRLL 350 (361)
T ss_pred HCCCCCCHHHHHHHHHHHH
T ss_conf 6489842011049879999