HHsearch alignment for GI: 254780627 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.

Probab=96.38  E-value=0.09  Score=32.61  Aligned_cols=40  Identities=25%  Similarity=0.301  Sum_probs=31.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCC---CCEEEEEHHHH
Q ss_conf             48986278888579999999999863068---81686469888
Q gi|254780627|r  198 PLFIHASVGLGKTHLLQAIANASIKRQPN---LRVVYLTAEYF  237 (502)
Q Consensus       198 PLfi~G~~GlGKTHLl~ai~~~~~~~~~~---~~v~y~~~e~F  237 (502)
T Consensus         2 ~i~i~G~aG~GKTtll~kl~~~wa~g~~~~~~~~vf~~~~r~~   44 (165)
T pfam05729         2 TVILQGEAGSGKTTLLQKLALLWAQGKLPQDFDFVFFLPCREL   44 (165)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHH
T ss_conf             8999827989899999999999986984369728999995670